Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A3298 |
Symbol | |
ID | 6486912 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | + |
Start bp | 3205832 |
End bp | 3206446 |
Gene Length | 615 bp |
Protein Length | 204 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 642738593 |
Product | putative ligase |
Protein accession | YP_002042314 |
Protein GI | 194442249 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0212] 5-formyltetrahydrofolate cyclo-ligase |
TIGRFAM ID | [TIGR02727] 5,10-methenyltetrahydrofolate synthetase |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.000163659 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 89 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGCAAC TTCCCGAACT CTCTTTATCA CGACAAGAAA TCCGCCGAAT GATTCGGCAA CGTCGCCGTG CGCTGACGCC AGAGCAGCAA CGCCGCTTTG GTCAACAGGC CGCCGCCCGA ATGCTCAGCT TTCCTCCCGT CGTGATGGCG CACACTGTCG CCGTGTTTCT CTCCTTTGAT GGCGAACTCG ACACCCAGCC GCTGATAGAA CAGCTATGGC AAGCGGGCAA GCGCGTCTAC CTTCCGGTTC TTCATCCCTT TAGCCCTGGC AACCTCCTGT TCCTGCACTA TCATCCGCAG AGTGCGCTGG TGACCAACCG CTTAAAGATC CAGGAGCCAC GGCTTGATGT CCGCGACGTA TTGCCGCTGC CAAAGCTGGA TGTGCTGGTA ACGCCGTTAG TCGCGTTTGA CGAAGACGGG CAGCGCCTGG GGATGGGCGG CGGATTTTAT GACCGTACGT TGCAAAACTG GCAGCAGCAT AAGATCCTAC CCGTGGGCTA CGCGCATGAT TGCCAGTTAG TAGAAAAACT GCCAGTTGAA GAGTGGGATA TCCCGCTGCC TGCGGTGGTG ACGCCGTCCA AAATTTGGGA GTGGCAGCCG TGTTTTGTCG ATTGA
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Protein sequence | MTQLPELSLS RQEIRRMIRQ RRRALTPEQQ RRFGQQAAAR MLSFPPVVMA HTVAVFLSFD GELDTQPLIE QLWQAGKRVY LPVLHPFSPG NLLFLHYHPQ SALVTNRLKI QEPRLDVRDV LPLPKLDVLV TPLVAFDEDG QRLGMGGGFY DRTLQNWQQH KILPVGYAHD CQLVEKLPVE EWDIPLPAVV TPSKIWEWQP CFVD
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