| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A3248 |
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| Symbol | kduD |
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| ID | 6482754 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011080 |
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| Strand | - |
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| Start bp | 3161912 |
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| End bp | 3162673 |
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| Gene Length | 762 bp |
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| Protein Length | 253 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 642738546 |
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| Product | 2-deoxy-D-gluconate 3-dehydrogenase |
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| Protein accession | YP_002042268 |
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| Protein GI | 194446482 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | [TIGR01832] 2-deoxy-D-gluconate 3-dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 0.000371746 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGATTTTGA ATGCATTTTC TCTTGAAGGT AAAGTCGCGG TTGTGACGGG GTGCGATACC
GGATTGGGGC AGGGGATGGC GTTAGGGCTG GCGGAAGCGG GCTGTGACAT TGTCGGTATT
AACATTGTTG AACCGACGGA AACTATTGCG CGCGTCACCG CTCTGGGACG TCGTTTTTTA
AGCCTGACGG CCGATCTGCG CCAAATCGAT GGTATTCCGG CGCTACTGGA ACGGGCGGTG
GCGGAATACG GTCATATTGA TATTCTGGTG AATAACGCGG GTTTGATCCG TCGTGAAGAT
GCGATTGATT TCACGGAAAA AGACTGGGAT GACGTCATGA ACCTGAACAT CAAGAGCGTG
TTCTTTATGT CTCAGGCGGC GGCAAAACAT TTTATTGCCC AGGGCAACGG CGGCAAAATT
ATTAATATCG CGTCTATGCT TTCCTTCCAG GGCGGCATTC GCGTTCCGTC TTATACCGCG
TCGAAAAGCG GCGTAATGGG AATAACGCGT CTGATGGCGA ACGAGTGGGC GAAACACAAT
ATCAATGTAA ACGCCATCGC GCCGGGCTAT ATGTCCACGA ATAATACCCA GCAATTGCGC
GCTGATGCAC AACGTAGCGC CGAAATTCTC GACCGTATTC CGGCTGGACG TTGGGGGCTA
CCGGGCGATT TAATGGGCCC GGTAGTCTTC CTGGCATCCA GCGCCGCTGA TTATGTTAAC
GGCTATACCA TAGCGGTAGA TGGCGGTTGG CTGGCGCGTT AA
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| Protein sequence | MILNAFSLEG KVAVVTGCDT GLGQGMALGL AEAGCDIVGI NIVEPTETIA RVTALGRRFL
SLTADLRQID GIPALLERAV AEYGHIDILV NNAGLIRRED AIDFTEKDWD DVMNLNIKSV
FFMSQAAAKH FIAQGNGGKI INIASMLSFQ GGIRVPSYTA SKSGVMGITR LMANEWAKHN
INVNAIAPGY MSTNNTQQLR ADAQRSAEIL DRIPAGRWGL PGDLMGPVVF LASSAADYVN
GYTIAVDGGW LAR
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