| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A3247 |
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| Symbol | |
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| ID | 6483488 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011080 |
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| Strand | - |
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| Start bp | 3160140 |
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| End bp | 3161558 |
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| Gene Length | 1419 bp |
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| Protein Length | 472 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 642738545 |
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| Product | L-arabinose/proton symport protein |
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| Protein accession | YP_002042267 |
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| Protein GI | 194442626 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00879] MFS transporter, sugar porter (SP) family |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 0.000138124 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGTCTCTA TTAATCATGA CTCTGCTTTA ACGCCGCGTT CGCTTCGCGA CACACGACGT
ATGAATATGT TTGTTTCGGT TTCTGCAGCG GTTGCGGGAC TGTTATTTGG TCTGGATATC
GGCGTTATCG CCGGGGCGCT GCCTTTTATT ACCGACCATT TCGTACTGAC CAGCCGGCTG
CAGGAGTGGG TCGTCAGCAG TATGATGCTT GGCGCGGCAA TTGGCGCATT ATTTAACGGC
TGGCTTTCAT TCCGGCTGGG GCGTAAGTAT AGCCTGATGG CTGGCGCGAT TTTGTTCGTG
CTCGGCTCGC TGGGGTCGGC GTTTGCTTCC AGCGTGGAAG TATTGATTGG CGCCCGCGTG
ATACTGGGCG TAGCAGTAGG GATTGCCTCC TATACCGCGC CGCTTTATCT CTCTGAAATG
GCTAGCGAAA ATGTTCGCGG CAAAATGATC AGTATGTATC AACTGATGGT GACGTTAGGC
ATTGTGCTGG CTTTTTTATC CGATACGGCA TTCAGCTACA GCGGCAACTG GCGCGCGATG
TTGGGCGTGC TGGCGCTTCC TGCGGTGTTG CTCATTATTC TGGTGGTATT CCTGCCGAAT
AGTCCGCGTT GGCTGGCGCA AAAAGGTCGC CATATTGAAG CGGAAGAGGT GCTGCGTATG
CTGCGCGATA CCTCGGAAAA AGCCCGTGAT GAACTGAATG AGATTCGGGA AAGCCTCAAA
CTCAAGCAGG GCGGGTGGGC ATTATTTAAA GCTAACCGCA ATGTTCGCCG CGCCGTGTTC
CTCGGTATGC TGCTTCAGGC AATGCAGCAG TTCACCGGCA TGAACATCAT TATGTACTAT
GCGCCGCGCA TTTTTAAAAT GGCCGGCTTT ACCACCACGG AACAGCAAAT GATCGCTACG
CTGGTGGTCG GACTGACCTT TATGTTCGCG ACGTTTATCG CCGTCTTTAC GGTCGATAAG
GCCGGGCGTA AACCGGCGTT AAAAATCGGT TTCAGCGTAA TGGCGTTAGG GACATTGGTG
TTGGGCTACT GCCTGATGCA GTTTGATAAC GGTACGGCAT CAAGCGGTCT CTCCTGGCTT
TCCGTTGGGA TGACGATGAT GTGTATCGCC GGTTACGCGA TGAGCGCCGC TCCGGTGGTG
TGGATACTGT GTTCGGAAAT CCAGCCGCTG AAATGCCGTG ATTTTGGCAT TACCTGTTCA
ACCACGACAA ACTGGGTATC GAACATGATC ATCGGCGCGA CATTCCTGAC ACTGTTGGAC
AGCATTGGCG CGGCAGGTAC ATTCTGGCTT TACACCGCGC TGAATATCGC TTTTATCGGC
ATCACTTTCT GGCTGATTCC GGAAACCAAA AATGTCACCC TGGAGCACAT CGAACGCAAG
CTGATGGCGG GCGAGAAGCT AAGAAATATT GGCGTGTAA
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| Protein sequence | MVSINHDSAL TPRSLRDTRR MNMFVSVSAA VAGLLFGLDI GVIAGALPFI TDHFVLTSRL
QEWVVSSMML GAAIGALFNG WLSFRLGRKY SLMAGAILFV LGSLGSAFAS SVEVLIGARV
ILGVAVGIAS YTAPLYLSEM ASENVRGKMI SMYQLMVTLG IVLAFLSDTA FSYSGNWRAM
LGVLALPAVL LIILVVFLPN SPRWLAQKGR HIEAEEVLRM LRDTSEKARD ELNEIRESLK
LKQGGWALFK ANRNVRRAVF LGMLLQAMQQ FTGMNIIMYY APRIFKMAGF TTTEQQMIAT
LVVGLTFMFA TFIAVFTVDK AGRKPALKIG FSVMALGTLV LGYCLMQFDN GTASSGLSWL
SVGMTMMCIA GYAMSAAPVV WILCSEIQPL KCRDFGITCS TTTNWVSNMI IGATFLTLLD
SIGAAGTFWL YTALNIAFIG ITFWLIPETK NVTLEHIERK LMAGEKLRNI GV
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