| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A3238 |
|---|
| Symbol | |
|---|
| ID | 6482707 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011080 |
|---|
| Strand | - |
|---|
| Start bp | 3152210 |
|---|
| End bp | 3154369 |
|---|
| Gene Length | 2160 bp |
|---|
| Protein Length | 719 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 642738538 |
|---|
| Product | bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase |
|---|
| Protein accession | YP_002042260 |
|---|
| Protein GI | 194445409 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG0204] 1-acyl-sn-glycerol-3-phosphate acyltransferase
[COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 0.000000871446 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCTGTTTG GATTTTTCCG TAACCTGTTT CGCGTGCTTT ATCGTGTGCG CGTCACTGGC
GATGTCCGGG TGCTACAGGG GAACCGGGTC TTAATTACCC CCAATCACGT TTCATTTATC
GATGGTATGT TACTGGCGCT GTTTTTGCCG GTACGGCCTG TCTTTGCGGT ATATACCTCC
ATCAGCCAGC AATGGTATAT GCGCTGGTTA ACGCCGCTGA TCGATTTTGT GCCGCTCGAC
CCCACTAAAC CCATGTCCAT TAAACACCTG GTGCGTCTGG TGGAACAGGG GCGTCCAGTG
GTGATTTTCC CGGAAGGGCG GATTTCCGTG ACCGGCTCGC TGATGAAAAT TTATGACGGC
GCAGGCTTTG TGGCGGCAAA ATCGGGCGCA ACCGTCATTC CGCTCCGCAT TGACGGCGCG
GAGCTTACCC CTTTCAGTCG CCTGAAAGGT CTGGTTAAAC GGCGCTTATT CCCCCGCATT
CAGCTTCATA TTTTACCGTC GACGCAAATA CCGATGCCGG AAGCGCCGCG CGCGCGCGAC
AGACGTAAGA TAGCGGGTGA GATGCTGCAC CAGATCATGA TGGAAGCGCG TATGGCGGTG
CGCCCGCGCG AGACGTTATA CGAATCGTTG CTGGCGGCGC AATATCGTTA CGGCGCGGGT
AAAAACTGTA TTGAGGACAT TAACTTTACG CCGGATACGT ATCGTAAGTT ACTGACCAAG
ACGCTTTTTG TTGGCCGGAT TCTGGAAAAG TACAGCGTTG AGGGCGAGAA AATCGGTTTA
ATGCTGCCGA ATGCCGCCAT CAGCGCGGCG GTGATTTTCG GCGCGGTTTC TCGTCGCCGC
ATTCCGGCCA TGATGAACTA CACGGCGGGG GTAAAAGGGC TGACCAGCGC GATTACCGCG
GCGGAAATTA AAACGATTTT TACCTCCCGC CAGTTCCTCG ATAAAGGTAA ATTGTGGCAC
CTGCCGGAAC AGCTAACGCA GGTTCGCTGG GTTTACCTGG AAGATTTAAA AGCGGACGTC
ACACCCGCCG ACAAGCTGTG GATTTTTGCC CACCTCCTGG CGCCGCGACT GGCGCAGGTA
AAACAGCAGC CGGAAGACGC GGCGATCATT CTTTTTACCT CCGGCTCGGA AGGGCACCCG
AAAGGGGTGG TGCACAGCCA TAAAAGCATT CTGGCGAACG TCGAGCAGAT AAAAACGATT
GCGGATTTCA CCGCCAATGA CCGTTTTATG TCGGCGCTGC CGCTCTTTCA CTCGTTCGGT
TTGACGGTGG GCCTGTTTAC GCCGTTGTTG ACCGGCGCGG AAGTATTTCT TTATCCAAGT
CCGCTGCACT ATCGCATTGT GCCGGAACTG GTCTATGACC GTAACTGTAC CGTGCTGTTT
GGTACGTCAA CCTTCCTCGG CAACTATGCG CGCTTTGCCA ATCCGTATGA TTTTTATCGC
CTGCGCTATG TGGTGGCCGG TGCGGAAAAA CTTCAGGAGA GCACCAAACA ACTGTGGCAG
GATAAATTCG GTCTGCGCAT TCTTGAGGGC TACGGGGTAA CGGAATGCGC GCCAGTAGTC
TCGATTAACG TGCCGATGGC GGCTAAGCCT GGCACTGTTG GCCGCATTCT GCCTGGCATG
GACGCGCGTC TGCTGGCGGT GCCCGGTATT GAAAACGGCG GTCGGCTACA GCTGAAAGGG
CCGAATATCA TGAATGGCTA TCTGCGCGTG GAAAAACCGG GCGTGCTGGA GGTGCCGTCG
GCGGAAAACT CCAGAGGCGA AACTGAGCGC GGCTGGTACG ACACGGGCGA TATTGTACGC
TTCGATGAAA ATGGTTTTGT GCAGATTCAG GGGCGCGCGA AACGCTTTGC GAAAATTGCT
GGCGAAATGG TCTCGCTGGA GATGGTCGAG CAACTGGCGC TTGGCGTTTC GGCGGACAAA
ATGCACGCTA CCGCCATTAA AAGCGATGCC AGCAAAGGTG AAGCGCTGGT ACTGTTTACG
ACTGACAGCG AACTCACCCG AGAAAAGTTA CAGCACTATG CTCGTGAACA CGGTATTCCG
GAACTTGCCG TCCCGCGTGA TATCCGTTAT CTGAAGCAGC TTCCCTTGCT TGGCAGCGGG
AAACCCGATT TTGTGACGCT GAAAAGTTGG GTGGATGCGC CGGAACAACA TCATGAGTGA
|
|---|
| Protein sequence | MLFGFFRNLF RVLYRVRVTG DVRVLQGNRV LITPNHVSFI DGMLLALFLP VRPVFAVYTS
ISQQWYMRWL TPLIDFVPLD PTKPMSIKHL VRLVEQGRPV VIFPEGRISV TGSLMKIYDG
AGFVAAKSGA TVIPLRIDGA ELTPFSRLKG LVKRRLFPRI QLHILPSTQI PMPEAPRARD
RRKIAGEMLH QIMMEARMAV RPRETLYESL LAAQYRYGAG KNCIEDINFT PDTYRKLLTK
TLFVGRILEK YSVEGEKIGL MLPNAAISAA VIFGAVSRRR IPAMMNYTAG VKGLTSAITA
AEIKTIFTSR QFLDKGKLWH LPEQLTQVRW VYLEDLKADV TPADKLWIFA HLLAPRLAQV
KQQPEDAAII LFTSGSEGHP KGVVHSHKSI LANVEQIKTI ADFTANDRFM SALPLFHSFG
LTVGLFTPLL TGAEVFLYPS PLHYRIVPEL VYDRNCTVLF GTSTFLGNYA RFANPYDFYR
LRYVVAGAEK LQESTKQLWQ DKFGLRILEG YGVTECAPVV SINVPMAAKP GTVGRILPGM
DARLLAVPGI ENGGRLQLKG PNIMNGYLRV EKPGVLEVPS AENSRGETER GWYDTGDIVR
FDENGFVQIQ GRAKRFAKIA GEMVSLEMVE QLALGVSADK MHATAIKSDA SKGEALVLFT
TDSELTREKL QHYAREHGIP ELAVPRDIRY LKQLPLLGSG KPDFVTLKSW VDAPEQHHE
|
|---|
| |