| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A3234 |
|---|
| Symbol | |
|---|
| ID | 6485974 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011080 |
|---|
| Strand | + |
|---|
| Start bp | 3148596 |
|---|
| End bp | 3149309 |
|---|
| Gene Length | 714 bp |
|---|
| Protein Length | 237 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 642738534 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002042256 |
|---|
| Protein GI | 194443086 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0861] Membrane protein TerC, possibly involved in tellurium resistance |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.00228616 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 0.000000995784 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGTTATTTG CATGGATAAC CGATCCTAAT GCCTGGCTGG CGCTCGGTAC GCTGACGCTG
CTGGAGATTG TACTTGGGAT CGACAACATT ATTTTTCTTT CTCTGGTGGT AGCAAAACTT
CCCACGGCGC AACGAAACCA CGCACGGCGG CTTGGGTTGG CGGCGGCGAT GGTTATGCGC
CTGGCGCTGC TGGCGTCAAT CGCCTGGGTC ACTCGGCTGA CTAATCCGCT GTTTGAGCTT
TTCGGCGAAG CGATTTCCGC CCGCGATCTC ATTCTTCTAC TGGGCGGGTT ATTTTTAATC
TGGAAAGCCA GCAAGGAGAT CCATGAGTCC ATCGAAGGCG AAGAAGAAGG GTTAAAAACC
CGGGTTTCTT CTTTCCTGGG CGCAATAGTG CAGATTATGC TGCTGGATAT TATTTTCAGC
CTTGATTCAG TTATCACAGC GGTTGGTCTC TCCGATCATC TGTTTATTAT GATGGCGGCA
GTCGTTATTG CCGTGGGTGT CATGATGTTT GCGGCACGGC CCATCGGCGA GTTTGTTGAT
CGCCATCCGT CGGTAAAAAT GCTGGCGCTC TCCTTTCTGA TCCTGGTTGG CTTTACCCTG
ATTCTGGAAA GTTTCGACGT TCACGTTCCG AAAGGGTATA TCTATTTCGC CATGTTCTTC
TCTATCGCAG TAGAGAGCCT GAACCTGTTG CGTAATAAAA AGAATCCGCT GTAA
|
|---|
| Protein sequence | MLFAWITDPN AWLALGTLTL LEIVLGIDNI IFLSLVVAKL PTAQRNHARR LGLAAAMVMR
LALLASIAWV TRLTNPLFEL FGEAISARDL ILLLGGLFLI WKASKEIHES IEGEEEGLKT
RVSSFLGAIV QIMLLDIIFS LDSVITAVGL SDHLFIMMAA VVIAVGVMMF AARPIGEFVD
RHPSVKMLAL SFLILVGFTL ILESFDVHVP KGYIYFAMFF SIAVESLNLL RNKKNPL
|
|---|
| |