Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A3124 |
Symbol | |
ID | 6484774 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | + |
Start bp | 3040072 |
End bp | 3040836 |
Gene Length | 765 bp |
Protein Length | 254 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 642738436 |
Product | DeoR family transcriptional regulator |
Protein accession | YP_002042160 |
Protein GI | 194445118 |
COG category | [G] Carbohydrate transport and metabolism [K] Transcription |
COG ID | [COG1349] Transcriptional regulators of sugar metabolism |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 53 |
Fosmid unclonability p-value | 0.0605743 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGATACCTA CTGAGCGTCG ACAAATCATT CTTGATATGG TGGCGGAGAA AGGCATCGTC AGTATCGCTG AACTGACCGA GCGCATGCAT GTATCCCACA TGACTATCCG CCGTGATTTA CAAAAACTGG AGCAGCAAGG CGCGGTAATC CAGGTCTCTG GCGGCGTGCA ATCATCGACT CGCGTGGCGC ACGAACCCTC GCATCAGATC AAAACCGAAC TGGCGACGCC GCAGAAAGCG GCGATTGGCA AACTGGCCGC CAGCCTGGTA CAGCCAGAAA GCTGTATCTA CCTTGATGCA GGTACGACCA CGCTGGCGAT TGCCAGGCAG CTGGTTACGA TGAATAAACT TACGGTGGTG ACCAATGATT TCGTTATCGC CGATTACCTG ATGGACAATA GCAATTGCAC AATTATTCAC ACTGGCGGGG CGGTATGCCG GGAAAACCGG TCGTGCGTCG GTGAAGCCGC AGCGACGCTT TTGCGCGGGC TGATGATTGA CCAGGCCTTT ATTTCCGCCT CTTCCTGGAG CGTGCGCGGT ATTTCAACGC CGGCAGAAGA TAAAGTCACG GTGAAACGGG CCGTCGCCAG CGCCAGCCGC CAAAAAATTC TGGTGTGCGA CGCGACCAAA TACGGCCAGG TCGCGACGTG GCTGGCGTTA CCGCTGGCGG AATTCAACCA AATCGTCACC GATGACGGCC TGCCGGAAAG CGCAATTCGG GCGCTGGCTA AAGTGGATAT CTCACTGCTG ATGGCCAAAA AATAG
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Protein sequence | MIPTERRQII LDMVAEKGIV SIAELTERMH VSHMTIRRDL QKLEQQGAVI QVSGGVQSST RVAHEPSHQI KTELATPQKA AIGKLAASLV QPESCIYLDA GTTTLAIARQ LVTMNKLTVV TNDFVIADYL MDNSNCTIIH TGGAVCRENR SCVGEAAATL LRGLMIDQAF ISASSWSVRG ISTPAEDKVT VKRAVASASR QKILVCDATK YGQVATWLAL PLAEFNQIVT DDGLPESAIR ALAKVDISLL MAKK
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