| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A3093 |
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| Symbol | epaR |
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| ID | 6484021 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011080 |
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| Strand | - |
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| Start bp | 3009094 |
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| End bp | 3009885 |
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| Gene Length | 792 bp |
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| Protein Length | 263 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 642738405 |
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| Product | type III secretion apparatus protein SpaR/YscT/HrcT |
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| Protein accession | YP_002042129 |
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| Protein GI | 194443393 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4791] Type III secretory pathway, component EscT |
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| TIGRFAM ID | [TIGR01401] type III secretion protein SpaR/YscT/HrcT |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.00000327697 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCTTTACG CGTTGTACTT TGAAATTCAT CACCTGGTTG CGTCTGCGGC ACTAGGGTTT
GCTCGCGTAG CGCCGATTTT TTTCTTCCTG CCGTTTTTGA ATAGCGGGGT ATTAAGCGGC
GCGCCGAGAA ACGCCATTAT CATCCTGGTG GCATTGGGAG TATGGCCGCA TGCATTGAAC
GAGGCGCCGC CGTTTTTATC GGTGGCGATG ATCCCGTTAG TTCTGCAAGA AGCGGCGGTA
GGCGTCATGC TGGGCTGTCT GCTGTCATGG CCTTTTTGGG TTATGCATGC GCTGGGTTGT
ATTATCGATA ACCAGCGAGG GGCAACGCTA AGTAGCAGTA TCGATCCGGC AAACGGTATT
GATACCTCGG AAATGGCTAA TTTCCTGAAT ATGTTTGCCG CTGTCGTTTA TTTACAAAAC
GGCGGTCTGG TCACGATGGT TGACGTGTTA AATAAAAGCT ATCAGCTATG CGATCCGATG
AACGAGTGCA CGCCTTCATT ACCGCCGCTA TTAACGTTTA TTAATCAGGT GGCTCAAAAC
GCCTTGGTTC TGGCCAGTCC GGTGGTATTA GTGCTGTTGC TGTCAGAAGT ATTCCTGGGT
TTATTGTCGC GCTTTGCTCC GCAAATGAAC GCTTTTGCGA TTTCACTGAC GGTAAAAAGC
GGTATTGCCG TTTTAATTAT GCTGCTTTAT TTCTCTCCGG TACTACCGGA CAATGTACTG
CGACTCTCTT TCCAGGCCAC AGGGTTAAGC AGTTGGTTTT ACGAGCGAGG GGCGACGCAT
GTCCTCGAAT AA
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| Protein sequence | MLYALYFEIH HLVASAALGF ARVAPIFFFL PFLNSGVLSG APRNAIIILV ALGVWPHALN
EAPPFLSVAM IPLVLQEAAV GVMLGCLLSW PFWVMHALGC IIDNQRGATL SSSIDPANGI
DTSEMANFLN MFAAVVYLQN GGLVTMVDVL NKSYQLCDPM NECTPSLPPL LTFINQVAQN
ALVLASPVVL VLLLSEVFLG LLSRFAPQMN AFAISLTVKS GIAVLIMLLY FSPVLPDNVL
RLSFQATGLS SWFYERGATH VLE
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