| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A3002 |
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| Symbol | |
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| ID | 6483826 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011080 |
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| Strand | - |
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| Start bp | 2926372 |
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| End bp | 2927706 |
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| Gene Length | 1335 bp |
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| Protein Length | 444 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 642738318 |
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| Product | GntR family transcriptional regulator |
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| Protein accession | YP_002042047 |
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| Protein GI | 194442950 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 0.00227723 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCCGCGCT ATCAGCACAT CGCTCGTCAG TTAAAAACGG CCATTGAGCA AGGAGAACTC
GCGCCCGGAA CGCGCTTGCC TTCCAGCCGG ACGTGGGCGC AGGAACTGGG CGTTTCTCGC
GCCACGGTGG AAAATGCCTA TGGCGAGCTG GTGGCGCAGG GCTGGCTGGA GCGACGTGGT
CAGGCAGGCA CGTTTGTGAG CAACGCTCTA CGGTTTGAGA CGGCGCCGCC GATACCCGCT
GTTTTTGCCG GAGAAAGTCC GGAACCGAAA CCCTTTCAGA TGGGGTTACC GGCGCTGGAT
CTCTTTCCAC GCGAGAAGTG GGCGCGAGTG ATGGGGCGTC GGTTGCGCAC GCAGACGCGC
TTCGATCTGG CATTAGGCGA CGTCTGCGGC GAGGCGATTT TGCGCCAGGC GATAGTCGAT
TACCTGCGGG TTTCGCGTAG CATTGAATGC CTGCCGGAAC AGGTATTTAT TACCTCCGGA
TATGCGGATT CTATGCGGCT AATCCTGCGT ACATTGTCTG TGCCGGGAGA CAGCATGTGG
GTGGAAGATC CCGGTTTTCC GTTAATTCGC CCGGTGATAA CGCAGGAGGG GATTACGCTG
GCGCCGATTC CGGTCGATGC CGATGGGCTG AATGTCGCGG CGGGGATGCG GGATTGCCCG
CAGGGGCGCT TTGCATTGGT GACGCCCGCC CACCAAAGTC CGTTGGGGGT GGCGCTGTCG
TTAACTCGCC GACGGCAACT TCTGGCATGG GCGGCGAATG TGCAGGCCTG GATTATTGAA
GATGACTACG ACAGCGAATT TCGTTATCAC GGTAAACCGC TTCCGCCACT CAAGAGTCTG
GATGCCCCGC AGCGAGTGAT TTACGCCGGA ACGTTCAGTA AGTCGCTCTT TCCGGCATTA
CGTACCGCCT GGCTGGTGGT GCCGATAAAG CAGATTGAGC ATTTCCGCCA GCAGGTGTCG
CTGATGCCCT GTAGCGTACC GTTGTTATGG CAGCACACGC TGGCTGATTT TATCCGTGAT
GGCCATTTCT GGCGGCATCT GAAAAAGATG CGTCAACATT ATGCTCAGCG ACGGTTATGG
ATTGAAGAGG CGCTGGCAGA ACAGGGATTT GTCGTGACAT TACAGAAAGG CGGTATTCAA
TTGGTTATTG AGGTTGAAGG CGATGATAAA GCGCAGGTAG CAAAAGCGAA TCAGGCCGGA
CTGGCGGTAC AGGCGCTAAG CCGTTGGCGA GTGGTTTCAT CAGGAAAGGG GGGCATTTTA
CTGTCGTTTA CCAATATTAC TTCCGCTGGC ATGGCGAAAC AGGTCGCGTG GCAGCTTCGA
CAGGCGATAC AGTAA
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| Protein sequence | MPRYQHIARQ LKTAIEQGEL APGTRLPSSR TWAQELGVSR ATVENAYGEL VAQGWLERRG
QAGTFVSNAL RFETAPPIPA VFAGESPEPK PFQMGLPALD LFPREKWARV MGRRLRTQTR
FDLALGDVCG EAILRQAIVD YLRVSRSIEC LPEQVFITSG YADSMRLILR TLSVPGDSMW
VEDPGFPLIR PVITQEGITL APIPVDADGL NVAAGMRDCP QGRFALVTPA HQSPLGVALS
LTRRRQLLAW AANVQAWIIE DDYDSEFRYH GKPLPPLKSL DAPQRVIYAG TFSKSLFPAL
RTAWLVVPIK QIEHFRQQVS LMPCSVPLLW QHTLADFIRD GHFWRHLKKM RQHYAQRRLW
IEEALAEQGF VVTLQKGGIQ LVIEVEGDDK AQVAKANQAG LAVQALSRWR VVSSGKGGIL
LSFTNITSAG MAKQVAWQLR QAIQ
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