| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A2888 |
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| Symbol | trmD |
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| ID | 6484765 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011080 |
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| Strand | - |
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| Start bp | 2817786 |
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| End bp | 2818553 |
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| Gene Length | 768 bp |
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| Protein Length | 255 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 642738208 |
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| Product | tRNA (guanine-N(1)-)-methyltransferase |
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| Protein accession | YP_002041937 |
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| Protein GI | 194446273 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0336] tRNA-(guanine-N1)-methyltransferase |
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| TIGRFAM ID | [TIGR00088] tRNA (guanine-N1)-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00244341 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 74 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTTTATTG GCATAGTTAG CCTGTTTCCT GAAATGTTCC GCGCAATTAC CGATTACGGG
GTAACTGGCC GGGCAGTAAA AAAAGGCCTG CTGAACATCC AAAGCTGGAG TCCTCGCGAC
TTCGCGCATG ACCGGCACCG TACCGTGGAC GACCGTCCTT ACGGCGGCGG ACCGGGGATG
TTAATGATGG TGCAACCCTT GCGGGACGCC ATTCACGCAG CAAAAGCCGC GGCAGGTGAA
GGCGCTAAAG TGATTTATCT GTCGCCTCAG GGACGCAAGC TTGATCAAGC GGGCGTTAGC
GAGCTGGCCA CGAATCAGAA GCTTATTCTG GTGTGTGGTC GCTACGAAGG CGTAGATGAG
CGCGTAATTC AGACCGAAAT TGACGAAGAA TGGTCAATTG GCGATTACGT TCTCAGCGGT
GGCGAACTAC CGGCAATGAC GCTGATTGAC TCCGTCGCCC GGTTTATACC GGGGGTTCTG
GGGCATGAGG CATCAGCAAT CGAAGATTCG TTTGCTGATG GGTTGCTGGA TTGTCCGCAC
TATACGCGCC CTGAAGTGTT AGAGGGGATG GAAGTACCGC CAGTATTGCT GTCGGGAAAC
CATGCTGAGA TACGTCGCTG GCGTTTGAAA CAGTCGCTGG GCCGAACCTG GCTTAGAAGA
CCTGAACTTC TGGAAAACCT GGCTCTGACT GAAGAGCAAG CAAGGTTGCT GGCGGAGTTC
AAAACAGAAC ACGCACAACA GCAGCATAAA CATGATGGGA TGGCATAG
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| Protein sequence | MFIGIVSLFP EMFRAITDYG VTGRAVKKGL LNIQSWSPRD FAHDRHRTVD DRPYGGGPGM
LMMVQPLRDA IHAAKAAAGE GAKVIYLSPQ GRKLDQAGVS ELATNQKLIL VCGRYEGVDE
RVIQTEIDEE WSIGDYVLSG GELPAMTLID SVARFIPGVL GHEASAIEDS FADGLLDCPH
YTRPEVLEGM EVPPVLLSGN HAEIRRWRLK QSLGRTWLRR PELLENLALT EEQARLLAEF
KTEHAQQQHK HDGMA
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