Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A2755 |
Symbol | glyA |
ID | 6483427 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | - |
Start bp | 2693731 |
End bp | 2694984 |
Gene Length | 1254 bp |
Protein Length | 417 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 642738083 |
Product | serine hydroxymethyltransferase |
Protein accession | YP_002041817 |
Protein GI | 194445772 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0112] Glycine/serine hydroxymethyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.418331 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 89 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTAAAGC GTGAAATGAA CATTGCCGAT TATGATGCCG AATTGTGGCA GGCTATGGAG CAGGAAAAAG TACGTCAGGA AGAGCACATC GAACTGATCG CCTCCGAAAA CTACACCAGC CCGCGCGTGA TGCAGGCGCA GGGGTCTCAG CTGACCAACA AATACGCTGA AGGTTATCCG GGCAAGCGCT ACTACGGCGG TTGCGAATAC GTTGATGTCG TTGAGCAGCT GGCTATCGAC CGCGCGAAAG AACTGTTCGG CGCCGACTAC GCTAACGTGC AGCCGCACTC CGGTTCTCAG GCTAACTTCG CTGTTTACAC CGCGCTGCTG CAGCCGGGCG ACACCGTTCT GGGTATGAAC CTGGCGCAGG GCGGCCACCT GACTCACGGC TCCCCGGTTA ACTTCTCCGG TAAACTGTAC AACATCGTAC CTTACGGTAT CGATGAGTCC GGTAAAATTG ACTATGACGA GATGGCGAAG CTGGCCAAAG AGCACAAGCC GAAGATGATT ATCGGTGGCT TCTCTGCCTA CTCCGGCGTG GTTGACTGGG CAAAAATGCG TGAAATCGCT GACAGCATCG GCGCATACCT GTTTGTCGAC ATGGCGCACG TGGCGGGCCT GATTGCCGCA GGCGTTTACC CGAACCCGGT TCCGCACGCT CACGTTGTCA CCACCACCAC CCACAAAACC CTGGCGGGTC CGCGCGGCGG CCTGATCCTG GCGAAGGGCG GCGATGAAGA GCTGTACAAA AAACTGAACT CCGCCGTGTT CCCAAGCGCG CAGGGCGGCC CGCTGATGCA CGTGATCGCG GGTAAAGCGG TAGCACTGAA AGAAGCGATG GAGCCGGAGT TCAAAGTTTA CCAGCAGCAG GTGGCGAAAA ACGCCAAAGC GATGGTAGAA GTGTTCCTGA ACCGCGGCTA CAAAGTGGTG TCTGGCGGCA CTGAGAACCA CCTGTTCCTG CTGGACCTGG TGGATAAAAA CCTGACCGGT AAAGAAGCTG ACGCCGCGCT GGGCCGTGCT AACATCACGG TGAACAAAAA CAGCGTGCCG AACGATCCTA AGAGCCCGTT CGTGACTTCC GGTATCCGCA TCGGTTCTCC AGCGGTCACT CGTCGCGGCT TCAAAGAAGC GGAAGTGAAA GAGCTGGCTG GCTGGATGTG TGACGTGCTG GACAACATCA ATGATGAAGC CACCATTGAA CGCGTGAAAG CGAAAGTACT GGATATCTGC GCCCGCTTCC CGGTTTACGC GTAA
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Protein sequence | MLKREMNIAD YDAELWQAME QEKVRQEEHI ELIASENYTS PRVMQAQGSQ LTNKYAEGYP GKRYYGGCEY VDVVEQLAID RAKELFGADY ANVQPHSGSQ ANFAVYTALL QPGDTVLGMN LAQGGHLTHG SPVNFSGKLY NIVPYGIDES GKIDYDEMAK LAKEHKPKMI IGGFSAYSGV VDWAKMREIA DSIGAYLFVD MAHVAGLIAA GVYPNPVPHA HVVTTTTHKT LAGPRGGLIL AKGGDEELYK KLNSAVFPSA QGGPLMHVIA GKAVALKEAM EPEFKVYQQQ VAKNAKAMVE VFLNRGYKVV SGGTENHLFL LDLVDKNLTG KEADAALGRA NITVNKNSVP NDPKSPFVTS GIRIGSPAVT RRGFKEAEVK ELAGWMCDVL DNINDEATIE RVKAKVLDIC ARFPVYA
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