Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A2742 |
Symbol | iscS |
ID | 6483627 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | - |
Start bp | 2681586 |
End bp | 2682800 |
Gene Length | 1215 bp |
Protein Length | 404 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 642738070 |
Product | cysteine desulfurase |
Protein accession | YP_002041804 |
Protein GI | 194446260 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1104] Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes |
TIGRFAM ID | [TIGR02006] cysteine desulfurase IscS [TIGR03402] cysteine desulfurase NifS |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.46384 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 99 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAATTAC CGATTTATCT CGACTACTCC GCAACCACGC CGGTGGACCC GCGTGTTGCC GAGAAAATGA TGCAGTTTCT GACCCTGGAC GGAACCTTTG GGAACCCGGC GTCTCGTTCA CACCGTTTCG GCTGGCAGGC TGAAGAAGCC GTCGATATCG CCCGCAACCA GATTGCTGAA CTGGTCGGCG CCGACCCGCG TGAAATCGTC TTTACCTCAG GGGCGACGGA GTCCGATAAC CTGGCGATTA AAGGCGCTGC CAACTTTTAT CAGAAAAAAG GCAAGCACAT CATCACCAGC AAGACCGAGC ACAAAGCGGT GCTGGACACC TGCCGTCAGC TTGAGCGCGA AGGGTTTGAA GTGACCTACC TGGCGCCCCA GCGCAACGGC ATCATCGATC TCAACGAGCT CGAAGCAGCG ATGCGTGACG ACACCATTCT GGTTTCCATC ATGCACGTGA ACAACGAAAT CGGCGTGGTG CAGGATATCG CGACCATCGG CGAAATGTGC CGCGCGCGCG GTATCATCTA CCACGTTGAC GCCACCCAGA GCGTGGGCAA ACTGCCTATC GACTTGAGCC AACTGAAAGT GGATCTGATG TCCTTCTCCG GTCATAAAAT TTATGGTCCG AAAGGCATTG GCGCGCTGTA TGTGCGTCGT AAGCCGCGTA TTCGCATTGA AGCGCAGATG CATGGCGGCG GGCACGAACG CGGTATGCGC TCTGGTACTC TGCCTGTCCA CCAGATCGTC GGCATGGGCG AAGCTTACCG TATCGCGAAA GAAGAGATGG AGACCGAAAT GGCCCGTCTG CGCGGTCTGC GTAACCGTCT GTGGAACGGC ATCAAAGATA TTGAAGAAGT TTACCTGAAC GGCGACCTTG AGCAGGGCGC GCCAAACATT CTCAACGTGA GCTTTAACTA CGTTGAAGGC GAGTCGCTGA TCATGGCGCT GAAAGACCTG GCGGTCTCTT CCGGTTCCGC CTGCACCTCC GCCAGTCTGG AACCGTCCTA CGTGCTGCGC GCGTTGGGCA TGAATGACGA GCTGGCGCAT AGCTCTATCC GTTTCTCTTT AGGTCGTTTT ACCACTGAAG AAGAGATCGA CTACACCATT GATCTGGTTC GTAAATCCAT TGGCCGCCTG CGTGACCTTT CTCCACTGTG GGAAATGTAC AAGCAGGGTG TGGATCTGAA CAGCATCGAA TGGGCACATC ATTAA
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Protein sequence | MKLPIYLDYS ATTPVDPRVA EKMMQFLTLD GTFGNPASRS HRFGWQAEEA VDIARNQIAE LVGADPREIV FTSGATESDN LAIKGAANFY QKKGKHIITS KTEHKAVLDT CRQLEREGFE VTYLAPQRNG IIDLNELEAA MRDDTILVSI MHVNNEIGVV QDIATIGEMC RARGIIYHVD ATQSVGKLPI DLSQLKVDLM SFSGHKIYGP KGIGALYVRR KPRIRIEAQM HGGGHERGMR SGTLPVHQIV GMGEAYRIAK EEMETEMARL RGLRNRLWNG IKDIEEVYLN GDLEQGAPNI LNVSFNYVEG ESLIMALKDL AVSSGSACTS ASLEPSYVLR ALGMNDELAH SSIRFSLGRF TTEEEIDYTI DLVRKSIGRL RDLSPLWEMY KQGVDLNSIE WAHH
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