Gene SNSL254_A2602 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A2602 
Symbol 
ID6484386 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp2525491 
End bp2527680 
Gene Length2190 bp 
Protein Length729 aa 
Translation table11 
GC content51% 
IMG OID642737935 
Productdiguanylate cyclase 
Protein accessionYP_002041675 
Protein GI194443679 
COG category[T] Signal transduction mechanisms 
COG ID[COG2200] FOG: EAL domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.116026 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones72 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGGATA AGTGTAACGT ATTAAAAAAT ATAAAAATAT TCTTACTGGC CTTCTGCCTG 
ACCGTTCCGG CTATTCTGCT ATCTCGTCTC ATTTCTCCCC GCGCCACAAT TGATTCCAGC
TATATCTTTC TGGCCTGGCT ACCGCTCTGC GTCATGTTTT CCGTGCTGTT CTTATTTGGC
CGCCGTGGCG TCGCGCCGAT GGTAAGCGGA ATGATGTTGA CTAATGAATG GAATTTTCAT
TTACCTCTGC CACAGGCGAT GGTGCTGCTA TTTTGCCAGA CGTTTCCCGT GTTGCTGGTT
TGCGCTATCG TACGCTGGCA GCTGGGCGCG CGCTGGCGCT ACGGAATACC CAACCAAGGC
ATCTGGCTAC GCGTTTTCTG GTTAGGGTTA ATGACGCCGT TTGGCATAAA AATCAGTATG
CATCTGGCGG GGCACTACCT GGCTTTCCCG GTGACCATCT CTACCTTCTT TGGCACCGGC
ACCGCTATTT TCTCGATTGT TGATTTATTG AGTCTGATTT CTGCCGCGCT TATTTTTACC
CTCTTTTTCT ATTATCCGCT GCGGATGATA GTCAGCCCGC ACTATATTCG TATTTTCTGG
CGGAGGGATA TCGCTCCTTA TCTCGCCAAA GAAAAACGCC TGTTTACGCT TCTCTGGTTT
GCCACTCTGG CGACGCTATT AGCGGTGCTG TGTACGCCTT TCGAGACAAA GTATATTGCT
GGCTATCTGG TGCCAGTCCT GTTCATTGGA TTTACCATCG GCGTGGGGAA AATCAGCTAT
CCGCTGTTGA ATTTTAGTTG GGCTCTCACT GCGCTATTCC TGCTTAGCTA TAACCGCAAT
TTTCTGCAGG GCGTGGGCTC AGAATATTCG CTGGCATTTA TCCTTTCAGT TCTCATTTCT
TTTAGTATTT GTTTGTTGTA CATGGCGCGG ATTAATCAAC GCAGCGAATG GTTGAATCGA
CAATGGCACT CGCAGGCATT GACCGATCCG TTGACGCAAC TGCCTAACCT GCGCGCGCTG
GAGCAGTTTC TTTTACAGGA TGCCGGGCAA AGCGTGTGTT ATCTACGCAT GGAAAACCTG
GAATTTCTGA GCCGTCATTA CGGTATGCAG ATGCGCGTGC ATTGCGAACG CGAGGTGTTT
CGCGTATTGC AGCCGCTGCT GCTGGAAAAG GAGAAAATTT TCCATCTGCC GGGCAGTGAA
TTATTGCTGG TATTGACGGG ACCGGAGACG GAAGCCCGCC TGCAATATAT GCTTAATGTG
CTTAATAACC GCAAAATTTA CTGGAACAAT ACCGGTCTGG ACATGGAATA CGGCGCATCG
TGGGGAACAT TCGATGGTCG CCAGGAAACC TTGCAACCGC TGTTGGGGCA GTTAAGCTGG
CTGGCGGAGC AATCCTGTTC GCATCGTCGG GTGCTTGCAC TGACCCAGAG TATTGAAGCC
GCTTCCGGGC AGACGACGGA ACGGGTGCTA CGGTTGCAGA AAATCCGTCA GGCGCTGGAG
CGTGGCGCGC TGGTTTTGTA TGCGCAACCC ATTCGCGACG CGCAGGGAAA AGGGTATGAC
GAGATTCTGA CGCGGCTTCG GTGCGACGAC GGTATCATGA TGCCGAATCA GTTCATTCCG
CTTATCGCCC AGTTTAACCT GAGCGTACGG TTTGATATGC AGGTGATGGA AGCGCTCCTG
CAATGGTTGT CCGCGCATCC TTCGGCGGAG CAGGGGGCGC GTTTTTCGGT TAATTTGATG
CCGCTGACGC TGCTGCAAAA AGAGACGGCG TCGCGCATTA TGCAGCTTTT TAAACGCTAT
GGCGTCCCGC CTGCTTCGGT CATCATCGAA ATTACTGAAG AACAGGCCTT CTCTCATTCC
GAAATCAGTA TGCACAATAT CAACCAGCTG CGTAAGTTTG GTCTAAAAAT CGCCATTGAT
GATTTCGGCA CCGGTTATGC AAACTATGAA CGGCTAAAAC GCCTCAAGGC GGACATCATT
AAAATCGACG GTTGTTTCGT AAAAGATATT CTGACGGACT CCCTGGATGC GATGATTGTG
AAATCCATCA CTGATTTAGC GAAAGCGAAA TCGTTGAGCG TCGTGGCTGA GTTTGTTGAA
ACGCCTGCGC AGCGCGATCT GCTATTGCAG CTTGGCGTAC ACAGTTTGCA GGGATATCTG
ATTGGCCGCC CGCGCCCGTT AGGCAAATAA
 
Protein sequence
MPDKCNVLKN IKIFLLAFCL TVPAILLSRL ISPRATIDSS YIFLAWLPLC VMFSVLFLFG 
RRGVAPMVSG MMLTNEWNFH LPLPQAMVLL FCQTFPVLLV CAIVRWQLGA RWRYGIPNQG
IWLRVFWLGL MTPFGIKISM HLAGHYLAFP VTISTFFGTG TAIFSIVDLL SLISAALIFT
LFFYYPLRMI VSPHYIRIFW RRDIAPYLAK EKRLFTLLWF ATLATLLAVL CTPFETKYIA
GYLVPVLFIG FTIGVGKISY PLLNFSWALT ALFLLSYNRN FLQGVGSEYS LAFILSVLIS
FSICLLYMAR INQRSEWLNR QWHSQALTDP LTQLPNLRAL EQFLLQDAGQ SVCYLRMENL
EFLSRHYGMQ MRVHCEREVF RVLQPLLLEK EKIFHLPGSE LLLVLTGPET EARLQYMLNV
LNNRKIYWNN TGLDMEYGAS WGTFDGRQET LQPLLGQLSW LAEQSCSHRR VLALTQSIEA
ASGQTTERVL RLQKIRQALE RGALVLYAQP IRDAQGKGYD EILTRLRCDD GIMMPNQFIP
LIAQFNLSVR FDMQVMEALL QWLSAHPSAE QGARFSVNLM PLTLLQKETA SRIMQLFKRY
GVPPASVIIE ITEEQAFSHS EISMHNINQL RKFGLKIAID DFGTGYANYE RLKRLKADII
KIDGCFVKDI LTDSLDAMIV KSITDLAKAK SLSVVAEFVE TPAQRDLLLQ LGVHSLQGYL
IGRPRPLGK