| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A2587 |
|---|
| Symbol | |
|---|
| ID | 6486859 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011080 |
|---|
| Strand | - |
|---|
| Start bp | 2509471 |
|---|
| End bp | 2510781 |
|---|
| Gene Length | 1311 bp |
|---|
| Protein Length | 436 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 642737921 |
|---|
| Product | phosphoglycerate transport: protein for signal transmission |
|---|
| Protein accession | YP_002041661 |
|---|
| Protein GI | 194446129 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1840] ABC-type Fe3+ transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.259528 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 72 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGTCTCAAT ATTTTCTTTA TGTGATATCG ATATTTATGA ACGGGATCAC AAATCGACTT
TTCTCATGCT GTAGTCGTTT CGCCAGAGTG GGCGCTTTTA CGCTATGGCT GGCGGCAATA
TTCGGTTCTT GCCAGGCGTA CAGCCGCGAG CTGGTGATGG CAACGACCTT TTCACCCAGC
GCGACCGCCT GGATTATCCA GCGCTGGCAG ACGGAGCCGG GTTCCGTCAT GATTCGTACG
CTCAACCGTA CCAGCGGTTC TTTAGAGCAA TTACTTGATA CGGCGAATGC GGAAAATGTC
GATCTGATCC TGACGTCATC CCCCATGCTG TTGCAACACC TTCAGGAACA CCAAAAGCTG
GCGCTATTGG ATAGCGCGCC TGCCGCCAGC CAGAAGCTGG TGCCGCGTTC TATCCGCTCA
ACTTCAGTGG CGGTAGCGGT ATCCGGATTT GGGCTATTGA TCAATCGTTC AGCGCTCGCT
GCGCGCCATC TTCCGCCGCC TGCCGACTGG CAGGATATGG GCCTGCCCAG TTACCAGGGC
GCTCTATTAA TGAGCAGTCC GTCACGCTCA GACACCAATC ATTTGATGGT GGAGTCGCTG
TTGCAGCAAA AAGGCTGGAC GGCAGGGTGG GCGACGCTGC TGGCAATCTC GGGTAATCTG
GTCACGATTT CCTCTCGCAG TTTCGGCGTA GCGGATAAAA TTAAAAGCGG GCTTGGCGTT
GCCGGGCCGG TCATTGATAA CTATGCTAAT TTGCTACTTA ACGATCCTAA TCTTGCTTTT
ACCTATTTCC CATATTCTGC GGTGTCGCCC ACTTACGTCG CGGTGTTGAA AAACAGCCGT
CATGCAGACG AAGCGCGTGC TTTTATTCAT TACTTATTAA GTCCGAAAGG GCAAAGGATA
CTGGCTGACG CGAATACCGG TAAGTATCCC GTCGCACCGC TTAGCGCCGA TAATCCTCGC
GCCGCGCAAC AACAGCGTTT GATGGCCCAG CCGCCGTTGA ACTATCGCCT GATCCTGAAG
CGCCAGCAAC TGGTACAGCG CATGTTTGAT ACCGCGATCA GTTTTCGACT TGCGCAGCTT
AAAGATGCAT GGCGAGCGTT GCACAGCGCA GAAACGCGGC TTAAACGCCC CTTACCTGAA
ATCAGAGCTT TATTGACCAG CGTCCCGGTG GATGCGGCAA GCAGCGAGGA TGAAACCTGG
CTGGCGCAGT TTGATAATAA AAGCTTTGCC GAACAAAAAA TGATGGAGTG GCAGATCTGG
TTTCTGAACA ATCAGCGGCT GGCGATTCAC AAACTGGAAG AGCTGAAATG A
|
|---|
| Protein sequence | MSQYFLYVIS IFMNGITNRL FSCCSRFARV GAFTLWLAAI FGSCQAYSRE LVMATTFSPS
ATAWIIQRWQ TEPGSVMIRT LNRTSGSLEQ LLDTANAENV DLILTSSPML LQHLQEHQKL
ALLDSAPAAS QKLVPRSIRS TSVAVAVSGF GLLINRSALA ARHLPPPADW QDMGLPSYQG
ALLMSSPSRS DTNHLMVESL LQQKGWTAGW ATLLAISGNL VTISSRSFGV ADKIKSGLGV
AGPVIDNYAN LLLNDPNLAF TYFPYSAVSP TYVAVLKNSR HADEARAFIH YLLSPKGQRI
LADANTGKYP VAPLSADNPR AAQQQRLMAQ PPLNYRLILK RQQLVQRMFD TAISFRLAQL
KDAWRALHSA ETRLKRPLPE IRALLTSVPV DAASSEDETW LAQFDNKSFA EQKMMEWQIW
FLNNQRLAIH KLEELK
|
|---|
| |