| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A2437 |
|---|
| Symbol | ccmB |
|---|
| ID | 6483820 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011080 |
|---|
| Strand | - |
|---|
| Start bp | 2354161 |
|---|
| End bp | 2354820 |
|---|
| Gene Length | 660 bp |
|---|
| Protein Length | 219 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 642737775 |
|---|
| Product | heme exporter protein CcmB |
|---|
| Protein accession | YP_002041516 |
|---|
| Protein GI | 194445603 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG2386] ABC-type transport system involved in cytochrome c biogenesis, permease component |
|---|
| TIGRFAM ID | [TIGR01190] heme exporter protein CcmB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.249417 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 65 |
|---|
| Fosmid unclonability p-value | 0.632911 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGATGTGGC GTGTCTTCTG TCTCGAGCTG CGCGTGGCGT TCCGCCACGG CGCGGACATC
GCCGGCCCGC TGTGGTTCTT CCTGATGGTC ATCACCCTGT TTCCGTTAAG CGTCGGGCCG
CAGCCGCAGC TGCTGGCGCG TATCGCGCCG GGCATCATCC AGGTGGCGGC GCTGCTGGCC
TCGCTGCTGG CGCTGGAGCG GCTGTTTCGC GACGACCTGC AGGACGGCAG CCTGGAGCAG
CTGATGCTGC TGCCGGTGCC GCTGCCGGCG GTGGTGCTGG CGAAGGTGCT GGCGCACTGG
GCGGTGACCG GCCTGCCGCT GATTATGCTC TCCCCGCTGG TGGCGCTGCT GCTGGGGATG
GACGTGTACG GCTGGAAAAT CATGGCGCTG ACGCTGCTGC TCGGCACGCC GGCGCTGGGG
TTTCTCGCCG CGCCGGGCGT CGCGCTGACG GCCGGCCTGC GGCGCGGCGG CGTCCTGCTG
GGCATTCTGG TGCTGCCGCT GAGTGTCCCG GTGCTGATTT TCGCCACCGC GGCGATGGAC
GCGGCATCGA TGCATTTACC CGCTGACGGC TATCTGGCGG TGCTGGGAGC GCTGCTGGCG
GGCAGCGCGA CGTTAAGCCC GTTCGCCACC GCGGCGGCGC TGCGCATCAG TACGCAGTAG
|
|---|
| Protein sequence | MMWRVFCLEL RVAFRHGADI AGPLWFFLMV ITLFPLSVGP QPQLLARIAP GIIQVAALLA
SLLALERLFR DDLQDGSLEQ LMLLPVPLPA VVLAKVLAHW AVTGLPLIML SPLVALLLGM
DVYGWKIMAL TLLLGTPALG FLAAPGVALT AGLRRGGVLL GILVLPLSVP VLIFATAAMD
AASMHLPADG YLAVLGALLA GSATLSPFAT AAALRISTQ
|
|---|
| |