Gene SNSL254_A2430 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A2430 
Symbol 
ID6484141 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp2348474 
End bp2349121 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content52% 
IMG OID642737768 
Producttranscriptional regulator NarP 
Protein accessionYP_002041509 
Protein GI194442551 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.426027 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones64 
Fosmid unclonability p-value0.504703 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGAAG TAACACCTTT TCAGGTGCTT ATTGTGGACG ACCATCCACT TATGCGGCGA 
GGTATTCGTC AATTACTGGA ACTGGACCCG GCTTTTCATG TCGTTGCCGA AGCGGGTGAC
GGGGCGAGTG CGATCGATCT GGCGAATCGC ATTGAGCCCG ATCTGATCCT GCTGGATCTG
AATATGAAAG GTCTGAGCGG GTTAGATACC CTGAACGCGC TACGCCGGGA TGGTGTGACG
GCGCAAATTA TTATTCTTAC CGTCTCGGAT TCCGCCAGCG ACATCTACGC GCTGATCGAC
GCCGGCGCCG ACGGTTATTT GCTCAAAGAT AGCGATCCGG AAGTGCTGCT GGAGGCCATT
CGCAAAGGCG CTAACGGCGG TAAAGTCTTT AGCGATCGGG TCAATGAATA TCTGCGTGAG
CGCGAACGGT TTGGCGCGCA GGAAGATCCC TTTAGTATCC TGACCGAACG AGAGTTAGAT
GTTTTGCATG AGCTGGCGCA GGGGCTTTCT AACAAACAGA TTGCGTCAGT ACTGAATATT
TCTGAGCAGA CGGTTAAGGT GCACATTCGT AATCTACTTC GCAAGCTAAA CGTGCGCTCA
CGCGTCGCGG CGACCATTCT ATTTTTACAA ACACGCGGAA TACAGTAA
 
Protein sequence
MPEVTPFQVL IVDDHPLMRR GIRQLLELDP AFHVVAEAGD GASAIDLANR IEPDLILLDL 
NMKGLSGLDT LNALRRDGVT AQIIILTVSD SASDIYALID AGADGYLLKD SDPEVLLEAI
RKGANGGKVF SDRVNEYLRE RERFGAQEDP FSILTERELD VLHELAQGLS NKQIASVLNI
SEQTVKVHIR NLLRKLNVRS RVAATILFLQ TRGIQ