Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A2396 |
Symbol | |
ID | 6482427 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | - |
Start bp | 2314805 |
End bp | 2316493 |
Gene Length | 1689 bp |
Protein Length | 562 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 642737735 |
Product | PTS system fructose-specific transporter subunits IIBC |
Protein accession | YP_002041477 |
Protein GI | 194444019 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1299] Phosphotransferase system, fructose-specific IIC component [COG1445] Phosphotransferase system fructose-specific component IIB |
TIGRFAM ID | [TIGR00829] PTS system, fructose-specific, IIB component [TIGR01427] PTS system, fructose subfamily, IIC component |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 0.000856102 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAAACGC TGCTGATAAT TGACGCTAAT CTCGGCCAGG CTCGCGCTTA CATGGCGAAA ACCCTGCTTG GAGCGGCGGC GCATAAAGCA AATCTGGAAA TTATCGACAA TCCGAATGAT GCTGAACTGG CGATCGTGCT GGGCGAATCT CTGCCGAACG ACAATGCTCT GAACGGCAAA AAGGTTTGGC TGGGGGATAT TGGTCGCGCC GTCGCGCATC CGGAACTGTT TCTGAGTGAA GCCAAAAGCC ATGCGACCCC TTACAGCGCC CCTGCTGCGG CTGCTCCTGC GGCGAGCGGC GGTCCGAAAC GCGTGGTCGC GGTAACGGCC TGCCCGACCG GCGTCGCCCA TACTTTTATG GCGGCTGAAG CCATTGAAAC GGAAGCGAAA AAACGCGGCT GGTGGGTAAA AGTCGAAACG CGCGGCTCCG TGGGGGCCGG CAATGCCATC ACCCCGGAAG AGGTGGCGGA AGCGGATTTA GTGATTGTGG CGGCGGATAT CGAAGTGGAT CTGGCGAAGT TTGCCGGTCT CCCGATGTAC CGCACGTCGA CCGGCCTGGC GCTGAAAAAG ACGGCGCAGG AGCTGGATAA AGCCGTAGCG GAAGCAACGC CGTATCAACC GGCGGGTAAG GCATCGCAAG CGGCGACCGA AGGGAAGAAA GAGAGCGCTG GCGCATACCG GCATCTGTTG ACGGGCGTTT CTTACATGCT GCCTATGGTG GTTGCCGGGG GACTGTGTAT TGCGCTTTCC TTCGCCTTTG GTATTGAAGC CTTTAAGGTG CCGGACACGC TGGCGGCGGC GCTGATGCAG ATTGGCGGCG GTTCGGCGTT TGCGCTGATG GTGCCGGTAC TGGCGGGTTA TATCGCTTTC TCCATCGCGG ATCGCCCAGG CCTTACGCCA GGTCTGATTG GCGGTATGCT GGCGGTTAGC ACCGGTTCCG GTTTTATCGG CGGGATCATT GCCGGCTTCC TTGCCGGGTA TATGGCGAAG CTTATCAGTA CCAAACTGAA ACTTCCGCAA AGTATGGAAG CGCTGAAGCC AATCCTGATC ATCCCGTTAA TTTCCAGTCT GGTGGTGGGG CTGGCAATGA TTTACCTGAT CGGTAAACCG GTTGCCGGGA TTCTGGAAGG GCTCACCCAC TGGCTGCAAA CCATGGGGAC GGCAAACGCG GTGCTGCTGG GCGCGATTCT CGGCGGGATG ATGTGTACCG ACATGGGCGG CCCGGTGAAC AAAGCGGCGT ATGCGTTTGG CGTTGGTCTG CTGAGTACGC AAACTTACGC GCCGATGGCG GCGATCATGG CCGCAGGTAT GGTACCGCCG TTAGCGCTGG GTCTGGCGAC GATGGTGGCG CGCCGTAAGT TCGACAAAGC GCAGCAGGAA GGCGGTAAAG CGGCGTTGGT GCTGGGGCTG TGCTTTATCA CTGAAGGCGC TATTCCGTTT GCGGCACGCG ACCCGATGCG TGTACTGCCG TGCTGTATCG TTGGCGGCGC GTTGACCGGG GCCATTTCTA TGGCGGTAGG CGCAAAATTG ATGGCGCCGC ATGGCGGTCT GTTTGTTCTG CTTATCCCAG GCGCAATTAC ACCGGTATTG GGATACCTGC TGGCAATTGT GGCCGGTACG CTGGTGGCAG GGCTGGCTTA TGCCGTCCTG AAACGTCCGG AGACGGAAGT CGCGGCAAAA GCGGCGTAA
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Protein sequence | MKTLLIIDAN LGQARAYMAK TLLGAAAHKA NLEIIDNPND AELAIVLGES LPNDNALNGK KVWLGDIGRA VAHPELFLSE AKSHATPYSA PAAAAPAASG GPKRVVAVTA CPTGVAHTFM AAEAIETEAK KRGWWVKVET RGSVGAGNAI TPEEVAEADL VIVAADIEVD LAKFAGLPMY RTSTGLALKK TAQELDKAVA EATPYQPAGK ASQAATEGKK ESAGAYRHLL TGVSYMLPMV VAGGLCIALS FAFGIEAFKV PDTLAAALMQ IGGGSAFALM VPVLAGYIAF SIADRPGLTP GLIGGMLAVS TGSGFIGGII AGFLAGYMAK LISTKLKLPQ SMEALKPILI IPLISSLVVG LAMIYLIGKP VAGILEGLTH WLQTMGTANA VLLGAILGGM MCTDMGGPVN KAAYAFGVGL LSTQTYAPMA AIMAAGMVPP LALGLATMVA RRKFDKAQQE GGKAALVLGL CFITEGAIPF AARDPMRVLP CCIVGGALTG AISMAVGAKL MAPHGGLFVL LIPGAITPVL GYLLAIVAGT LVAGLAYAVL KRPETEVAAK AA
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