Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A2332 |
Symbol | |
ID | 6483444 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | - |
Start bp | 2250889 |
End bp | 2251635 |
Gene Length | 747 bp |
Protein Length | 248 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 642737673 |
Product | GntR family transcriptional regulator |
Protein accession | YP_002041415 |
Protein GI | 194445966 |
COG category | [K] Transcription |
COG ID | [COG2188] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.491871 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 72 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAACAAG CGCATACCCG GCTCATCGCG CAACTGAATG AACGAATTTC AGCGGCGGAT AATACGCCGC TATACATGAA ATTCGCCCAG ACGGTAAAGG ATGCCGTGCG CAGCGGTATT CTTGAGCACG GTAATATTTT GCCTGGCGAA CGCGATCTCA GCCAGCTTAC CGGCGTCTCG CGCATCACGG TACGGAAAGC GATGCAGGCG CTGGAAGAAG AGGGTGTCGT CACGCGCGCC CGCGGCTACG GTACGCAAAT CAATAATATC TTTGAATATT CCCTGAAAGA GGCGCGGGGA TTTTCTCAGC AGGTTGTCTT GCGCGGCAAA AAACCGGATA CGCTATGGGT TAACAAACGC GTGGTAAGTT GTCCGGATGA GGTCGCGCAG CATCTGGCGA TCCCCGCAGG CAGCGACGTC TTTTTACTCA AACGCATTCG TTATGTTGAT GAGGACGCGG TATCGATTGA AGAGTCCTGG GTGCCCGCGC ATCTGATTCA TGATGTCGAC GCGATTGGCA TTTCTCTGTA TGACTATTTT CGTCGCCAGC ACATTTACCC TCAGCGTACC CGATCCCGCG TTAGCGCCCG GATGCCGGAT GATGAGTTTC AGTCGCATAT TCAAATGGAT GGTAAAGTGC CGGTGCTGGT GATTAAGCAG GTGGCGCTCG ATCAGCAGCA GCGGCCTATT GAATACAGCA TCAGTTATTG TCGTAGCGAC CTATACGTTT TTGTGTGCGA GGAGTAG
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Protein sequence | MEQAHTRLIA QLNERISAAD NTPLYMKFAQ TVKDAVRSGI LEHGNILPGE RDLSQLTGVS RITVRKAMQA LEEEGVVTRA RGYGTQINNI FEYSLKEARG FSQQVVLRGK KPDTLWVNKR VVSCPDEVAQ HLAIPAGSDV FLLKRIRYVD EDAVSIEESW VPAHLIHDVD AIGISLYDYF RRQHIYPQRT RSRVSARMPD DEFQSHIQMD GKVPVLVIKQ VALDQQQRPI EYSISYCRSD LYVFVCEE
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