Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A2297 |
Symbol | |
ID | 6483122 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | - |
Start bp | 2209381 |
End bp | 2210292 |
Gene Length | 912 bp |
Protein Length | 303 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 642737643 |
Product | putative glycosyl transferase |
Protein accession | YP_002041385 |
Protein GI | 194445126 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0463] Glycosyltransferases involved in cell wall biogenesis |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.038696 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 59 |
Fosmid unclonability p-value | 0.220934 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCGCGGC CTGTGACTGT AGGCCGGACA AGCGTAGCGC CATGCGGCAA AACTATCTGG GGAATAAGCA TGACAACAGA CACTCCGCTG ATCTCAATTT ATATGCCAAC CTGGAACAGG CAGCAGTTGG CTATCCGGGC GATTAAATCA GTACTACGTC AGGACTACCG CCACTGGGAG ATGATCATCG TGGATGATTG CTCCTCGTCT TATCAGCAGC TACAACAATT TGTTGAGGAG CTGAACGACC CGCGCGTCCG TTATACCCAT AACGCCAGGA ATACCGGCGC CTGCGCGGTT CGCAACCAGG CCATTATGCA GGCGCAAGGA CACTACATTA CCGGTATTGA TGATGACGAT GAATGGACGC CAAACCGTCT GAGCGTGTTT CTGGCCCATA AACACCAGTT GACTACGCAC GCCTTTTTGT ATGCCAACGA CTATGTGTGC GAGGGCGAGG TCTACTCTCA GCCTGCCAGC CTGCCGCTGT ATCCGAAATC CCCTTATTCG CGCCGCTTGT TCTACAAGCG CAATATTATT GGCAATCAGG TTTTTACCTG GGCCTGGCGT TTTAAAGCGT GTTTGTTCGA TACCGAACTC AAGGCGGCGC AGGATTACGA CATTTTTCTG CGCATGGTGG TGGAGTATGG CGAACCGTGG AAAGTTGAAG AGGCGACGCA AATTTTACAT ATCAACCACG GCGAGATGCA GATTACCTCT TCGCCGAAAA AGTTCTCCGG CTATTTCCAT TTTTATCGTA AGCACAAAGA TAAATTCGAT CGCGCCAGCA AAAAATACCA GCTTTTTACG CTGTACCAAA TTCGCAATAA GCGAATGACC TGGCGCACGT TGCTGACGTT GCTCTCCGTG CGTAACAGCA AACGCCTGGC GGCCGGGCTG CGGGGGCGAT AA
|
Protein sequence | MARPVTVGRT SVAPCGKTIW GISMTTDTPL ISIYMPTWNR QQLAIRAIKS VLRQDYRHWE MIIVDDCSSS YQQLQQFVEE LNDPRVRYTH NARNTGACAV RNQAIMQAQG HYITGIDDDD EWTPNRLSVF LAHKHQLTTH AFLYANDYVC EGEVYSQPAS LPLYPKSPYS RRLFYKRNII GNQVFTWAWR FKACLFDTEL KAAQDYDIFL RMVVEYGEPW KVEEATQILH INHGEMQITS SPKKFSGYFH FYRKHKDKFD RASKKYQLFT LYQIRNKRMT WRTLLTLLSV RNSKRLAAGL RGR
|
| |