| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A2278 |
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| Symbol | rfbD |
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| ID | 6483106 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011080 |
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| Strand | - |
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| Start bp | 2188036 |
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| End bp | 2188935 |
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| Gene Length | 900 bp |
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| Protein Length | 299 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 642737624 |
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| Product | dTDP-4-dehydrorhamnose reductase |
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| Protein accession | YP_002041366 |
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| Protein GI | 194442608 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1091] dTDP-4-dehydrorhamnose reductase |
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| TIGRFAM ID | [TIGR01214] dTDP-4-dehydrorhamnose reductase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.00000104564 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAATATCT TACTTTTTGG TAAGACAGGG CAAGTAGGCT GGGAGTTGCA ACGTTCTCTG
GCACCAGTGG GGAATCTGAT TGCTCTGGAT GTCCATTCAA AAGAGTTTTG CGGTGATTTT
AGCAATCCGA AAGGCGTTGC CGAAACCGTT CGTAAGCTTC GTCCCGATGT GATTGTTAAC
GCAGCAGCCC ATACTGCAGT AGATAAAGCA GAGTCTGAAC CAGAACTGGC GCAGTTACTT
AACGCCACCA GTGTGGAAGC CATCGCTAAA GCAGCCAACG AAACTGGCGC ATGGGTAGTG
CATTATTCAA CCGATTATGT ATTTCCTGGT ACCGGCGATA TCCCATGGCA GGAAACGGAC
GCTACGTCGC CGCTGAATGT CTATGGCAAG ACCAAACTGG CGGGAGAAAA GGCCCTGCAG
GATAACTGCC CTAAGCATCT TATCTTCCGC ACCAGTTGGG TTTATGCCGG TAAGGGCAAT
AATTTCGCAA AGACAATGCT TCGTCTGGCG AAAGAGCGTC AGACACTTTC AGTCATCAAC
GATCAGTACG GTGCGCCAAC CGGTGCGGAA TTACTGGCTG ACTGCACGGC CCATGCGATC
CGTGTGGCGT TAAAGAAACC AGAAGTCGCA GGTCTTTACC ATCTGGTTGC CGGGGGAACC
ACAACCTGGC ATGACTACGC GGCCTTAGTC TTTGACGAGG CGCGCAAAGC AGGGATAACG
CTTGCGCTGA CTGAGCTTAA TGCTGTGCCG ACCAGCGCCT ACCCGACGCC GGCGAGCAGA
CCTGGCAATT CGCGTCTCAA TACTGAAAAG TTTCAGCGTA ATTTTGGCCT TATTCTGCCG
CAATGGGAAT TAGGAGTTAA GCGCATGCTG ACTGAAATGT TTACGACGAC AACCATCTGA
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| Protein sequence | MNILLFGKTG QVGWELQRSL APVGNLIALD VHSKEFCGDF SNPKGVAETV RKLRPDVIVN
AAAHTAVDKA ESEPELAQLL NATSVEAIAK AANETGAWVV HYSTDYVFPG TGDIPWQETD
ATSPLNVYGK TKLAGEKALQ DNCPKHLIFR TSWVYAGKGN NFAKTMLRLA KERQTLSVIN
DQYGAPTGAE LLADCTAHAI RVALKKPEVA GLYHLVAGGT TTWHDYAALV FDEARKAGIT
LALTELNAVP TSAYPTPASR PGNSRLNTEK FQRNFGLILP QWELGVKRML TEMFTTTTI
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