Gene SNSL254_A2264 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A2264 
Symbol 
ID6482768 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp2174022 
End bp2175179 
Gene Length1158 bp 
Protein Length385 aa 
Translation table11 
GC content37% 
IMG OID642737611 
Productglycosyl transferase, group 1 
Protein accessionYP_002041353 
Protein GI194444353 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value0.0000647656 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGAAATAA ATGAAATAAA AATATCTCTC GTTCATGAGT GGTTATTAAG TTATGCAGGC 
TCCGAACAGG TATCATCTGC CATCCTGCAT GTTTTTCCTG AAGCGAAGTT ATATTCGGTG
GTTGATTTTC TAACGGATGA ACAAAGAAGA CATTTTCTGG GGAAATATGC GACTACCACA
TTTATTCAAA ATTTACCTAA AGCTAAAAAA TTTTACCAGA AATATTTACC ACTAATGCCA
CTGGCTATTG AACAACTTGA TTTATCAGAT GCTAATATCA TCATTAGTAG CGCCCATTCC
GTTGCAAAAG GTGTTATTTC CGGACCAGAT CAGCTTCACA TTAGCTATGT TCATTCTCCT
ATTCGATATG CGTGGGATTT ACAGCATCAG TACCTTAATG AGTCTAACCT GAATAAAGGA
ATTAAAGGTT GGTTAGCAAA ATGGCTTCTT CACAAAATAC GAATTTGGGA TTCTCGAACC
GCAAATGGGG TTGATCATTT TATAGCTAAT TCTCAATATA TCGCGCGTAG AATTAAAAAA
GTATACAGAC GTGAGGCTTC AGTTATATAT CCGCCTGTAG ATGTGGATAA TTTTGAAGTA
AAAAATGAAA AGCAAGACTA TTATTTCACA GCATCCCGTA TGGTACCCTA CAAACGTATT
GATCTTATTG TCGAAGCCTT TAGTAAAATG CCGGAAAAGA AATTAGTAGT TATTGGTGAT
GGACCGGAGA TGAAAAAAAT AAAGAGCAAG GCTACAGACA ATATAAAATT GCTCGGTTAT
CAATCTTTTC CTGTTTTAAA AGAGTATATG CAGAGCGCCA GGGCGTTTGT TTTTGCAGCG
GAAGAGGACT TTGGAATAAT ACCTGTCGAA GCTCAAGCTT GCGGTACCCC TGTTATTGCC
TTTGGGAAGG GTGGGGCCTT AGAAACCGTT CGCCCACTAG GTGTAGAGGA ACCGACTGGC
ATTTTCTTCA AGGAACAGAA TATTGCTTCT TTGCATGAAG CTGTTAGTGA ATTTGAAAAA
AATGCATCAT TTTTTACATC TCAGGCTTGT AGAAAAAATG CAGAAAAATT TTCTCGATCA
AGATTTGAAC AAGAATTTAA GAACTTTGTT AATGAAAAGT GGAATCTTTT CAAAACAGAA
CAGATTATTA AACGTTAA
 
Protein sequence
MEINEIKISL VHEWLLSYAG SEQVSSAILH VFPEAKLYSV VDFLTDEQRR HFLGKYATTT 
FIQNLPKAKK FYQKYLPLMP LAIEQLDLSD ANIIISSAHS VAKGVISGPD QLHISYVHSP
IRYAWDLQHQ YLNESNLNKG IKGWLAKWLL HKIRIWDSRT ANGVDHFIAN SQYIARRIKK
VYRREASVIY PPVDVDNFEV KNEKQDYYFT ASRMVPYKRI DLIVEAFSKM PEKKLVVIGD
GPEMKKIKSK ATDNIKLLGY QSFPVLKEYM QSARAFVFAA EEDFGIIPVE AQACGTPVIA
FGKGGALETV RPLGVEEPTG IFFKEQNIAS LHEAVSEFEK NASFFTSQAC RKNAEKFSRS
RFEQEFKNFV NEKWNLFKTE QIIKR