Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A2264 |
Symbol | |
ID | 6482768 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | - |
Start bp | 2174022 |
End bp | 2175179 |
Gene Length | 1158 bp |
Protein Length | 385 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 642737611 |
Product | glycosyl transferase, group 1 |
Protein accession | YP_002041353 |
Protein GI | 194444353 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0438] Glycosyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 0.0000647656 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGAAATAA ATGAAATAAA AATATCTCTC GTTCATGAGT GGTTATTAAG TTATGCAGGC TCCGAACAGG TATCATCTGC CATCCTGCAT GTTTTTCCTG AAGCGAAGTT ATATTCGGTG GTTGATTTTC TAACGGATGA ACAAAGAAGA CATTTTCTGG GGAAATATGC GACTACCACA TTTATTCAAA ATTTACCTAA AGCTAAAAAA TTTTACCAGA AATATTTACC ACTAATGCCA CTGGCTATTG AACAACTTGA TTTATCAGAT GCTAATATCA TCATTAGTAG CGCCCATTCC GTTGCAAAAG GTGTTATTTC CGGACCAGAT CAGCTTCACA TTAGCTATGT TCATTCTCCT ATTCGATATG CGTGGGATTT ACAGCATCAG TACCTTAATG AGTCTAACCT GAATAAAGGA ATTAAAGGTT GGTTAGCAAA ATGGCTTCTT CACAAAATAC GAATTTGGGA TTCTCGAACC GCAAATGGGG TTGATCATTT TATAGCTAAT TCTCAATATA TCGCGCGTAG AATTAAAAAA GTATACAGAC GTGAGGCTTC AGTTATATAT CCGCCTGTAG ATGTGGATAA TTTTGAAGTA AAAAATGAAA AGCAAGACTA TTATTTCACA GCATCCCGTA TGGTACCCTA CAAACGTATT GATCTTATTG TCGAAGCCTT TAGTAAAATG CCGGAAAAGA AATTAGTAGT TATTGGTGAT GGACCGGAGA TGAAAAAAAT AAAGAGCAAG GCTACAGACA ATATAAAATT GCTCGGTTAT CAATCTTTTC CTGTTTTAAA AGAGTATATG CAGAGCGCCA GGGCGTTTGT TTTTGCAGCG GAAGAGGACT TTGGAATAAT ACCTGTCGAA GCTCAAGCTT GCGGTACCCC TGTTATTGCC TTTGGGAAGG GTGGGGCCTT AGAAACCGTT CGCCCACTAG GTGTAGAGGA ACCGACTGGC ATTTTCTTCA AGGAACAGAA TATTGCTTCT TTGCATGAAG CTGTTAGTGA ATTTGAAAAA AATGCATCAT TTTTTACATC TCAGGCTTGT AGAAAAAATG CAGAAAAATT TTCTCGATCA AGATTTGAAC AAGAATTTAA GAACTTTGTT AATGAAAAGT GGAATCTTTT CAAAACAGAA CAGATTATTA AACGTTAA
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Protein sequence | MEINEIKISL VHEWLLSYAG SEQVSSAILH VFPEAKLYSV VDFLTDEQRR HFLGKYATTT FIQNLPKAKK FYQKYLPLMP LAIEQLDLSD ANIIISSAHS VAKGVISGPD QLHISYVHSP IRYAWDLQHQ YLNESNLNKG IKGWLAKWLL HKIRIWDSRT ANGVDHFIAN SQYIARRIKK VYRREASVIY PPVDVDNFEV KNEKQDYYFT ASRMVPYKRI DLIVEAFSKM PEKKLVVIGD GPEMKKIKSK ATDNIKLLGY QSFPVLKEYM QSARAFVFAA EEDFGIIPVE AQACGTPVIA FGKGGALETV RPLGVEEPTG IFFKEQNIAS LHEAVSEFEK NASFFTSQAC RKNAEKFSRS RFEQEFKNFV NEKWNLFKTE QIIKR
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