Gene SNSL254_A2163 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A2163 
Symbol 
ID6484087 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp2085414 
End bp2085833 
Gene Length420 bp 
Protein Length139 aa 
Translation table11 
GC content50% 
IMG OID642737516 
ProductDNA polymerase V subunit UmuD 
Protein accessionYP_002041263 
Protein GI194443595 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG1974] SOS-response transcriptional repressors (RecA-mediated autopeptidases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.21769 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones60 
Fosmid unclonability p-value0.16696 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAATTTT TCAGACCTAC AGAGTTGCGC GAAATTATTC CTCTCCCATT TTTCAGTTAC 
TTAGTGCCGT GTGGATTCCC CAGCCCCGCA GCGGACTACA TTGAGCAGCG TATCGATCTT
AATGAGTTGC TCGTTTCTCA TCCCAGCTCA ACATATTTTG TCAAAGCCAC GGGTGATTCA
ATGATTGAAG CAGGCATCAG CGACGGCGAC CTGCTGGTGG TGGATAGCTC ACGGAACGCA
GACCACGGTG ACATTGTAAT TGCGGCAATT GAAGGAGAGT TCACCGTAAA ACGGTTGCAG
TTGCGCCCGA CAGTGCAGTT AATCCCCATG AACGGCGCCT ATCGACCCAT ACCTGTCGGC
AGTGAAGACA CGCTCGACAT ATTCGGGGTG GTGACCTTTA TCATTAAAGC GGTCAGTTGA
 
Protein sequence
MEFFRPTELR EIIPLPFFSY LVPCGFPSPA ADYIEQRIDL NELLVSHPSS TYFVKATGDS 
MIEAGISDGD LLVVDSSRNA DHGDIVIAAI EGEFTVKRLQ LRPTVQLIPM NGAYRPIPVG
SEDTLDIFGV VTFIIKAVS