Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A2150 |
Symbol | |
ID | 6486206 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | - |
Start bp | 2073997 |
End bp | 2075709 |
Gene Length | 1713 bp |
Protein Length | 570 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 642737504 |
Product | cellulose synthesis regulatory protein |
Protein accession | YP_002041251 |
Protein GI | 194446695 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2199] FOG: GGDEF domain |
TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.297138 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 49 |
Fosmid unclonability p-value | 0.0131316 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCCGCACG AAACACTGTT AGACAATCAA GGCTGGTTTA AAAAGCTGGC GCGGCGTTTT GGTCCCGGTC ATGTCGTCAA CACCTGTTTT CTGATCGTGA TGCTGTTCTC GACGCTACTT ACCTGGCGGG AAGTGATGAT ACTGAAAGAC GCGTATGTCG CCAGTCAGCG CAATCATCTG GGGAGCGTCG CGAATGTCCT TGACCGCCAA CTGCAATTCA ACATGGACAG GTTGATCTTT TTACGCAACG GTATGCATGA AGCGCTGGTG GCGCCGCTGG CTTTTTCCGC ATTGCAAAGC GCGGTGACGC AGTTTGAGCA ACGACGCGTC AGACATTTCT GGCAACTGGA GCTGGATAAG CGGCGGACAT TGCCGTTATA TGGCGTTTCC GATCAATTTG TCGCCCGGAC GACGCTTCTT TCGCGGGAGA GTCGTGACCT GGCAAATGAA TTAACCGCCA CTCTGGAGTT AGGGTATCTG GCGCGTCTGG CTCGCTCATC CGCCATGCTG ACGCTGGAGA CGATGTATGT TTCTCGCTCA GGGTTTTACC TCTCAACTCT CCCTACGGCG TACGGTAGCG ATATTGTCTC CCGTTACTAT CAGTACGTGA CTCAGCCCTG GTTTATCGAG CAAAGCCAAC GGCGTAACCC ACAGCGCGGC GTGCGGTGGT TTACCTCCGC ACAGTCCTAT GTTGCTGACG AGCAGAAAAA AGTGACAGCC AGTCTACCGC TGGATCACGA TAATTACTGG TATGGCGTAC TGGCAATGGA TATTCCCGTC GCGTCATTAC AGCGGTTCCT GCGCGATGCG GCCGAAAAGG ATATTGAAGG GGAATATCAG CTATACGATA ACCATCTCCG TTTGTTGACG GACTCCGCGC CGGAACAACA AACCGCGAAT ACGTTAAATG ACCGTGAGCG CGCCTTACTG GCGCGTGAAA TAGAAAAAGA TACCCTGGGC GGGCTGCGTT TAGGAACGCA TTATGTAAGC TGGGAGCGGC TGGATCATTT TGATGGCGTC CTGCTGCGCG TGCATACACT ACGTGAAGGC ATCCAAGGGA ATTTTGGCAG TATTAGTATC GCGCTGACGC TGTTATGGGT GCTTTTTACG GCGATGCTGT TGATCTCCTG GGGCGTTATT CGACATATGG TCAAAAACAT GTTTGTTCTG CAAAATTCGC TGCAATGGCA GGCATGGCAC GATCCGCTGA CCCGGCTATA TAACCGTGGC GCGCTGTTTG AAAAAGCGTC CAGGCTGGCA AAGCGCTATC GGGAAGCCCG CCAGCCATTT TCTGTGATAC AACTGGACTT AGATTATTTT AAAAGCGTTA ACGATCGCTT TGGCCATCAG GCAGGCGATC GCGTGTTGTC CCATGCCGCT GGGCTCATTG GCAGCACCAT TCGAGCGCAC GACATCGCCG GACGGGTAGG GGGCGAAGAG TTTTGTATCG TGCTGCCCGG TGCGACGAAA GCGCAGGCGC TGCAGATTGC CGAACGCATA CGCCAGCGCA TTAATGACAA AGAGATTCTG GTGACGAAAA GCACGACGCT TCGTATCAGC GCGTCAATGG GGATCAGTAG CGCGGAGGAA TACGGCGACT ATGATTTTGA GCAGTTGCAG TCGCTGGCCG ACAAACGGCT TTATTACGCC AAACAGTCCG GACGTAACCG TATTTGCGCC AGCGACGCGA CTCAGGAGCG GGAAAAGAAA TAG
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Protein sequence | MPHETLLDNQ GWFKKLARRF GPGHVVNTCF LIVMLFSTLL TWREVMILKD AYVASQRNHL GSVANVLDRQ LQFNMDRLIF LRNGMHEALV APLAFSALQS AVTQFEQRRV RHFWQLELDK RRTLPLYGVS DQFVARTTLL SRESRDLANE LTATLELGYL ARLARSSAML TLETMYVSRS GFYLSTLPTA YGSDIVSRYY QYVTQPWFIE QSQRRNPQRG VRWFTSAQSY VADEQKKVTA SLPLDHDNYW YGVLAMDIPV ASLQRFLRDA AEKDIEGEYQ LYDNHLRLLT DSAPEQQTAN TLNDRERALL AREIEKDTLG GLRLGTHYVS WERLDHFDGV LLRVHTLREG IQGNFGSISI ALTLLWVLFT AMLLISWGVI RHMVKNMFVL QNSLQWQAWH DPLTRLYNRG ALFEKASRLA KRYREARQPF SVIQLDLDYF KSVNDRFGHQ AGDRVLSHAA GLIGSTIRAH DIAGRVGGEE FCIVLPGATK AQALQIAERI RQRINDKEIL VTKSTTLRIS ASMGISSAEE YGDYDFEQLQ SLADKRLYYA KQSGRNRICA SDATQEREKK
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