Gene SNSL254_A2141 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A2141 
Symbol 
ID6482215 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp2069203 
End bp2069580 
Gene Length378 bp 
Protein Length125 aa 
Translation table11 
GC content60% 
IMG OID642737496 
Productflagellar biosynthesis protein FliO 
Protein accessionYP_002041243 
Protein GI194445467 
COG category[N] Cell motility 
COG ID[COG3190] Flagellar biogenesis protein 
TIGRFAM ID[TIGR03500] flagellar biosynthetic protein FliO 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value0.00267968 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGATGAAGA CAGAGGCCAC GGTTTCTCAG CCCACCGCGC CAGCCGGATC GCCGCTCATG 
CAGGTGAGCG GCGCATTAAT TGGCATTATT GCGCTCATTC TGGCGGCGGC CTGGGTGATT
AAGCGTATGG GATTCGCGCC AAAAGGAAAT AGCGTCCGGG GACTGAAGGT GTCAGCCAGC
GCCTCGCTTG GCCCGCGCGA ACGCGTGGTG ATTGTCGAGG TCGAAAATGC GCGTCTGGTA
CTGGGCGTGA CCGCCTCGCA GATCAACCTG CTGCACACCC TCCCGCCCGC GGAGAATGAC
ACGGAAGCAC CCGTTGCCCC ACCGGCGGAT TTCCAGAACA TGATGAAGAG TTTACTCAAG
CGTTCCGGGA GATCCTGA
 
Protein sequence
MMKTEATVSQ PTAPAGSPLM QVSGALIGII ALILAAAWVI KRMGFAPKGN SVRGLKVSAS 
ASLGPRERVV IVEVENARLV LGVTASQINL LHTLPPAEND TEAPVAPPAD FQNMMKSLLK
RSGRS