| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A2057 |
|---|
| Symbol | ruvC |
|---|
| ID | 6484130 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011080 |
|---|
| Strand | - |
|---|
| Start bp | 1998170 |
|---|
| End bp | 1998691 |
|---|
| Gene Length | 522 bp |
|---|
| Protein Length | 173 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 642737413 |
|---|
| Product | Holliday junction resolvase |
|---|
| Protein accession | YP_002041163 |
|---|
| Protein GI | 194444872 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0817] Holliday junction resolvasome, endonuclease subunit |
|---|
| TIGRFAM ID | [TIGR00228] crossover junction endodeoxyribonuclease RuvC |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 55 |
|---|
| Fosmid unclonability p-value | 0.0681914 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTCGATTA TTCTCGGTAT TGACCCCGGC TCGCGCATTA CCGGTTATGG CGTTATCCGT
CAGGTAGGCA GACAACTGAC CTATCTGGGC AGCGGATGTA TTCGCACCAA AGTCGATGAT
TTGCCGTCTC GTTTGAAGCT CATATACGCA GGCGTGACGG AAATCATCAC GCAGTTCCAG
CCGGACTATT TTGCTATCGA ACAAGTGTTT ATGGCGAAAA ATGCCGATTC AGCCCTCAAG
CTGGGACAGG CGCGCGGCGT CGCGATTGTC GCCGCGGTCA ATCAGGAACT GCCCGTGTTT
GAATACGCGG CGCGTCAGGT GAAGCAAACT GTCGTCGGTA TTGGTAGCGC GGAAAAAAGC
CAGGTACAGC ATATGGTTCG TACGTTGCTG AAGCTCCCCG CTAACCCGCA GGCAGACGCC
GCAGATGCGC TGGCTATCGC CATTACGCAT TGCCATGTTA GCCAGAACGC GATGCAAATG
AGCGAGAGCC GACTCAATCT GGCGCGGGGA AGGTTGCGCT AA
|
|---|
| Protein sequence | MSIILGIDPG SRITGYGVIR QVGRQLTYLG SGCIRTKVDD LPSRLKLIYA GVTEIITQFQ
PDYFAIEQVF MAKNADSALK LGQARGVAIV AAVNQELPVF EYAARQVKQT VVGIGSAEKS
QVQHMVRTLL KLPANPQADA ADALAIAITH CHVSQNAMQM SESRLNLARG RLR
|
|---|
| |