Gene SNSL254_A2043 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A2043 
Symboleda 
ID6484519 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp1982566 
End bp1983207 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content58% 
IMG OID642737399 
Productketo-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase 
Protein accessionYP_002041149 
Protein GI194443661 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0800] 2-keto-3-deoxy-6-phosphogluconate aldolase 
TIGRFAM ID[TIGR01182] Entner-Doudoroff aldolase 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.801479 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones65 
Fosmid unclonability p-value0.713926 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAACT GGAAAACAAG TGCAGAAGCA ATCCTGACCA CCGGCCCGGT TGTCCCGGTC 
ATTGTAGTCA ATAAACTGGA GCACGCGGTG CCGATGGCTA AAGCGCTGGT GGCCGGGGGC
GTTCGCGTTC TGGAAGTGAC TTTACGTACG GCCTGCGCGA TGGATGCAAT TCGCGCTATC
GCTAAAGACG TGCCGGAAGC GATTGTCGGC GCCGGAACCG TTCTCAATCC GCAGCAGTTG
GCGGAGGTGA CGGAAGCGGG CGCGCAATTT GCGATTAGCC CGGGACTGAC TGAGCCACTG
CTGAAAGCCG CGACGGCAGG CACTATCCCA TTGATTCCCG GTATTAGCAC CGTTTCTGAA
CTGATGTTGG GCATGGACTA TGGTCTGAAA GAGTTCAAAT TCTTCCCGGC GGAAGCGAAT
GGCGGCACTA AAGCGTTGCA GGCGATTGCC GGCCCGTTCT CTCAGGTACG TTTCTGCCCA
ACCGGCGGCA TCTCTCCGGC AAACTATCGT GACTATCTGG CGCTGAAAAG CGTGTTGTGC
ATCGGCGGTT CCTGGCTGGT GCCGGCCGAC GCGCTGGAAG CGGGTGATTA CGATCGCATC
ACCAAACTGG CGCGCGAAGC GGTAGAAGGC GCGAAGCAGT AA
 
Protein sequence
MKNWKTSAEA ILTTGPVVPV IVVNKLEHAV PMAKALVAGG VRVLEVTLRT ACAMDAIRAI 
AKDVPEAIVG AGTVLNPQQL AEVTEAGAQF AISPGLTEPL LKAATAGTIP LIPGISTVSE
LMLGMDYGLK EFKFFPAEAN GGTKALQAIA GPFSQVRFCP TGGISPANYR DYLALKSVLC
IGGSWLVPAD ALEAGDYDRI TKLAREAVEG AKQ