Gene SNSL254_A1974 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A1974 
Symbol 
ID6485067 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand+ 
Start bp1930513 
End bp1931079 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content53% 
IMG OID642737340 
Productmembrane protein YebN 
Protein accessionYP_002041090 
Protein GI194443708 
COG category[S] Function unknown 
COG ID[COG1971] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.816628 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones63 
Fosmid unclonability p-value0.466937 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACTTTA CTGCTACTGT TCTTCTCGCT TTCGGCATGT CGATGGATGC TTTCGCGGCA 
TCAATTGGCA AAGGCGCCAC CCTACATAAA CCCAAATTCT CAGAAGCGTT GCGTACCGGC 
CTTATCTTTG GCGCGGTTGA AACGCTGACC CCGTTGATCG GCTGGGGGCT GGGGATATTG 
GCGAGTAAAT TTGTTCTGGA ATGGAACCAC TGGATAGCCT TTGTTCTGCT GATCTTTCTG 
GGCGGACGCA TGATCATCGA AGGTATCCGC GGCGGTAGTG ATGAAGATGA AACACCGTTA 
CGTCGCCACA GCTTTTGGCT ATTAGTCACG ACGGCTATCG CGACCAGCCT CGATGCGATG 
GCGGTTGGCG TCGGTCTGGC GTTTTTGCAG GTAAACATCA TCGCAACCGC ATTAGCTATC 
GGTTGCGCCA CGCTTATCAT GTCCACCCTC GGGATGATGA TCGGTCGCTT TATCGGCCCA 
ATGCTGGGTA AGCGTGCTGA AATTCTCGGC GGGGTCGTAC TGATAGGAAT TGGCGTCCAG 
ATCCTCTGGA CGCATTTTCA CGGTTAA
 
Protein sequence
MHFTATVLLA FGMSMDAFAA SIGKGATLHK PKFSEALRTG LIFGAVETLT PLIGWGLGIL 
ASKFVLEWNH WIAFVLLIFL GGRMIIEGIR GGSDEDETPL RRHSFWLLVT TAIATSLDAM 
AVGVGLAFLQ VNIIATALAI GCATLIMSTL GMMIGRFIGP MLGKRAEILG GVVLIGIGVQ 
ILWTHFHG