Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A1941 |
Symbol | |
ID | 6482987 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | - |
Start bp | 1901053 |
End bp | 1902351 |
Gene Length | 1299 bp |
Protein Length | 432 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 642737309 |
Product | D-amino acid dehydrogenase small subunit |
Protein accession | YP_002041059 |
Protein GI | 194445671 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.377151 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 90 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCGAGTTG TCATCCTGGG GAGTGGCGTA GTTGGCGTGA CCAGCGCCTG GTATTTGAGT CAGGCGGGGC ATGATGTCAC CGTCATCGAT CGCGAATCCG GCCCGGCGCA AGAAACCAGC GCGGCGAATG CCGGACAAAT TTCACCGGGA TATGCGGCGC CCTGGGCGGC CCCTGGCGTA CCGCTGAAGG CGATAAAATG GATGTTCCAG CGCCATGCGC CGCTGGCGGT GCGTCTGGAT GGCACCCCAT TTCAACTGAA GTGGATGTGG CAAATGCTGC GTAACTGCGA TACCCGGCAT TATATGGAAA ATAAAGGCCG CATGGTGCGC CTGGCGGAAT ATAGTCGCGA CTGTCTGAAA ACGCTACGCG CCGCGACCGG TATCGAATAT GAAGGCCGCC AGGGGGGAAC GCTACAACTC TTCCGCACCG CGCAACAGTA TGAGAACGCC ACCCGTGATA TCGCCGTGCT GGAAGATGCC GGGGTGCCGT ATCAGCTCCT GGAATCCAGC CGACTGGCGG AAGTTGAACC CGCTCTGGCT GAGGTTGCGC ATAAATTAAC CGGCGGACTG CGCTTACCGA ATGATGAAAC CGGGGACTGT CAGCTCTTTA CCCAGCGTCT GGCGCGCATG GCGGAGCAGG CGGGCGTAAC CTTTCGCTTT AATACTCCCG TGGAAAAATT ACTGTACGAA AATGATCAGA TTTACGGCGT GAAATGCGCC GATGAGATCA TTAAAGCAGA TGCGTATGTT ATGGCGTTTG GATCGTATTC GACGGCGATG CTTAAAGGCA TTGTTGATAT CCCGGTGTAT CCGCTGAAAG GCTATTCATT AACCATCCCA ATCGTCGAGC CAGACGGCGC GCCGGTATCG ACGATTCTTG ATGAAACCTA CAAAATCGCT ATTACGCGTT TTGATAAGCG TATTCGCGTG GGGGGAATGG CGGAAATCGT GGGCTTTAAT ACCGACTTAC TGCAACCGCG CCGCGAGACG CTGGAGATGG TTGTGCGCGA TCTCTTTCCG CGCGGCGGTC ATATTGAGCA GGCCACATTC TGGACCGGCC TGCGCCCCAT GACGCCGGAC GGCACGCCGG TAGTAGGACG CACCCGTTAT AAAAATCTGT GGCTTAATAC TGGACACGGC ACCTTAGGCT GGACGATGGC CTGCGGTTCA GGCCAGCTGT TAAGCGATAT CTTGTCGGGT CGCACGCCAG CGATACCCTA CGACGATCTG AGCGTGGCGC GATACCGTTC CGATTTTACG CCCACCCCCC CGCAACGTTT GCATAGCGCG CATAACTGA
|
Protein sequence | MRVVILGSGV VGVTSAWYLS QAGHDVTVID RESGPAQETS AANAGQISPG YAAPWAAPGV PLKAIKWMFQ RHAPLAVRLD GTPFQLKWMW QMLRNCDTRH YMENKGRMVR LAEYSRDCLK TLRAATGIEY EGRQGGTLQL FRTAQQYENA TRDIAVLEDA GVPYQLLESS RLAEVEPALA EVAHKLTGGL RLPNDETGDC QLFTQRLARM AEQAGVTFRF NTPVEKLLYE NDQIYGVKCA DEIIKADAYV MAFGSYSTAM LKGIVDIPVY PLKGYSLTIP IVEPDGAPVS TILDETYKIA ITRFDKRIRV GGMAEIVGFN TDLLQPRRET LEMVVRDLFP RGGHIEQATF WTGLRPMTPD GTPVVGRTRY KNLWLNTGHG TLGWTMACGS GQLLSDILSG RTPAIPYDDL SVARYRSDFT PTPPQRLHSA HN
|
| |