Gene SNSL254_A1905 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A1905 
Symbol 
ID6484437 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp1868291 
End bp1868668 
Gene Length378 bp 
Protein Length125 aa 
Translation table11 
GC content52% 
IMG OID642737274 
Productputative transcriptional regulator 
Protein accessionYP_002041024 
Protein GI194443817 
COG category[S] Function unknown 
COG ID[COG3094] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0754229 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones64 
Fosmid unclonability p-value0.507373 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGCTCA CGCTTCATCT TATCTGTGTT GCGCTCTCCG TCAGTTTGTT TGTCGCTCGT 
TACTGGTGGC GCTATTGCGG CCATGCGTTG GCCGCCGCGC GCTGGACACG AATCGTGCCT
CCCGTCATAG ATACCCTGTT ACTGCTTAGC GGTATTGGGT TAATCGTTAA AACGCACATC
CTGCCATTCA CGGAGTCGGG CTCATGGCTG ACTGAAAAAC TGTTTGGCGT TATCATCTAC
ATCGTTTTGG GTTTTATTGC GCTTGATTAT CGTCAGGCGC GCAGCCAGCA GGCGCGTTTT
ATCGCTTTCC CGCTGGCGCT GGTGGTGCTG TACATCATCA TTAAACTCGC CACCACAAAA
ATACCGTTAC TGGGGTAA
 
Protein sequence
MLLTLHLICV ALSVSLFVAR YWWRYCGHAL AAARWTRIVP PVIDTLLLLS GIGLIVKTHI 
LPFTESGSWL TEKLFGVIIY IVLGFIALDY RQARSQQARF IAFPLALVVL YIIIKLATTK
IPLLG