Gene SNSL254_A1898 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A1898 
Symbol 
ID6486663 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp1862250 
End bp1862900 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content53% 
IMG OID642737267 
Producttranscriptional regulator NarL 
Protein accessionYP_002041017 
Protein GI194442715 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones62 
Fosmid unclonability p-value0.335981 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATAATC AGGAACCGGC AACCATCCTG TTAATCGACG ACCATCCGAT GCTACGCACG 
GGTGTAAAGC AGCTTGTGAG TATGGCGCCC GATATCAGCG TGGTCGGAGA AGCCAGCAAC
GGTGAGCAGG GTATTGACCT GGCGGAATCG CTCGATCCCG ATCTGATCCT CCTTGATTTG
AATATGCCGG GAATGAATGG TCTCGAAACG CTGGATAAAT TACGCGAAAA AGCGCTGTCA
GGACGTATTG TCGTTTTCAG CGTATCCAAC CATGAAGAAG ATGTCGTCAC GGCGCTAAAG
CGCGGCGCGG ATGGTTATCT GTTGAAAGAC ATGGAGCCGG AGGACTTGCT CAAAGCGTTA
CAACAGGCCG CCGCCGGCGA AATGGTATTA AGTGAAGCGT TAACGCCGGT ACTGGCGGCC
AGCCTGCGGG CCAACCGCGC CACCACCGAT CGCGATGTAA CGCAACTCAC CCCGCGTGAG
CGCGATATTC TGAAGCTCAT TGCGCAGGGA TTGCCAAATA AGATGATTGC CCGACGTCTG
GATATCACCG AAAGTACGGT CAAAGTGCAC GTGAAACATA TGCTCAAGAA AATGAAGCTG
AAATCGCGCG TGGAGGCCGC CGTCTGGGTA CATCAGGAAC GTATCTTTTA A
 
Protein sequence
MNNQEPATIL LIDDHPMLRT GVKQLVSMAP DISVVGEASN GEQGIDLAES LDPDLILLDL 
NMPGMNGLET LDKLREKALS GRIVVFSVSN HEEDVVTALK RGADGYLLKD MEPEDLLKAL
QQAAAGEMVL SEALTPVLAA SLRANRATTD RDVTQLTPRE RDILKLIAQG LPNKMIARRL
DITESTVKVH VKHMLKKMKL KSRVEAAVWV HQERIF