| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A1864 |
|---|
| Symbol | |
|---|
| ID | 6482409 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011080 |
|---|
| Strand | - |
|---|
| Start bp | 1827609 |
|---|
| End bp | 1828331 |
|---|
| Gene Length | 723 bp |
|---|
| Protein Length | 240 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 642737238 |
|---|
| Product | transport protein TonB |
|---|
| Protein accession | YP_002040990 |
|---|
| Protein GI | 194444149 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0810] Periplasmic protein TonB, links inner and outer membranes |
|---|
| TIGRFAM ID | [TIGR01352] TonB family C-terminal domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.680203 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 71 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCCTTG ATTTACCTCG TCGCTTTCCC TGGCCGACAC TCCTTTCCGT AGGCATTCAT
GGTGCTGTAG TGGCAGGTTT GCTCTATACC TCGGTACATC AGGTTATTGA ATTGCCTGCG
CCAGCGCAGC CTATCACGGT GACAATGGTT TCACCCGCTG ACCTGGAACC GCCCCAGGCG
GTTCAGCCGC CGCCGGAGCC AGTGGTTGAA CCCGAACCGG AGCCAGAGCC GATCCCTGAA
CCGCCTAAAG AAGCGCCCGT GGTGATTGAG AAACCCAAAC CTAAGCCAAA ACCCAAGCCG
AAACCGAAAC CGGTGAAAAA GGTTGAAGAG CAGCCGAAGC GCGAAGTCAA ACCAGCTGCG
CCTCGTCCTG CCTCACCGTT TGAAAATAGC GCCCCGGCGC GGCCAACAAG CAGCACCGCC
TCGGCGACCA GCAAGCCGGC GGTGAGCGTA CCCACTGGAC CTCGCGCTCT GAGCCGTAAC
CAGCCGCAAT ATCCGGCGCG AGCACAGGCA TTACGTATTG AAGGCCGCGT AAAGGTGAAG
TTTGACGTGA CCGCTGCTGG GCGAGTGGAA AATGTACAGA TTCTATCCGC GCAGCCAGCC
AATATGTTTG AGCGTGAAGT TAAGAATGCG ATGCGAAAAT GGCGCTATGA AGCAGGCAAG
CCGGGTTCCG GGCTGGTGGT CAATATTATC TTCCGTCTGA ACGGTACGGC GCAGATTGAG
TAA
|
|---|
| Protein sequence | MTLDLPRRFP WPTLLSVGIH GAVVAGLLYT SVHQVIELPA PAQPITVTMV SPADLEPPQA
VQPPPEPVVE PEPEPEPIPE PPKEAPVVIE KPKPKPKPKP KPKPVKKVEE QPKREVKPAA
PRPASPFENS APARPTSSTA SATSKPAVSV PTGPRALSRN QPQYPARAQA LRIEGRVKVK
FDVTAAGRVE NVQILSAQPA NMFEREVKNA MRKWRYEAGK PGSGLVVNII FRLNGTAQIE
|
|---|
| |