Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A1834 |
Symbol | |
ID | 6485887 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | - |
Start bp | 1799504 |
End bp | 1800268 |
Gene Length | 765 bp |
Protein Length | 254 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 642737209 |
Product | phosphatidylglycerophosphatase B |
Protein accession | YP_002040961 |
Protein GI | 194445211 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0671] Membrane-associated phospholipid phosphatase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.127293 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 2.60377e-27 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGCTTTCAA TTGCGAGGCG CACCGCGGCA GGCGCCGCCC TGTTGCTTAT CATGCCGCTT GCCGTATGGG TATCAGGCTG GCAGTGGCAG CCAGGACATC AGGTCTGGTG GCTAAAAACG CTATTCTGGA TAACGGAAAC CGTGACCAAA CCCTGGGGCG TTATCACGCA TGTGATTCTT TGTGGATGGT TCTTATGGTG CCTGCGATTT CGCCTGCGCG CCGCCATTAT GCTGTTTGCG ATTCTCGGCG GGGCGATTAT CGTCGGGCAG GGCGTGAAGT CATGGGTAAA GGAGCGCGTA CAGGAGCCGC GGCCATTTGT GGTCTGGCTT GAAAAAACGC ACCATATTCC CGTCGATGAG TTCTACACTT TAAAGCGTAC AGAACGCGGA CATTTAGTGA AAGAGCAGTT GGCCGGGCAA CAGAACATCC CCGTTTTCCT GCGTCAGCAC TGGCAAAAAG AGACGGGCTT TGCGTTTCCC TCCGGACACA CCATGTTTGC AGCGAGCTGG GCGCTTTTGG CCGTGGGTCT GTTATGGCCG CGCAGACGGA CTTTCACCAT CGCGTTTTTG TTAGTCTGGG CGACCGGCGT AATGGGCAGC CGTTTGCTTC TGGGAATGCA CTGGCCGCGA GATTTAGTGG TCGCCACGCT CATCTCCTGG CTATTAGTTA CCCTGGCGAC CTGGCTGGCG CAGCGAATTT GCGGGCCGCT TATGCCGCCT CGTGAAGAAG CGCAAGAAAT TGCTGAACGC GAGCAGGAAA GCTGA
|
Protein sequence | MLSIARRTAA GAALLLIMPL AVWVSGWQWQ PGHQVWWLKT LFWITETVTK PWGVITHVIL CGWFLWCLRF RLRAAIMLFA ILGGAIIVGQ GVKSWVKERV QEPRPFVVWL EKTHHIPVDE FYTLKRTERG HLVKEQLAGQ QNIPVFLRQH WQKETGFAFP SGHTMFAASW ALLAVGLLWP RRRTFTIAFL LVWATGVMGS RLLLGMHWPR DLVVATLISW LLVTLATWLA QRICGPLMPP REEAQEIAER EQES
|
| |