Gene SNSL254_A1822 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A1822 
Symbol 
ID6483375 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand- 
Start bp1786512 
End bp1787489 
Gene Length978 bp 
Protein Length325 aa 
Translation table11 
GC content42% 
IMG OID642737198 
Producthypothetical protein 
Protein accessionYP_002040950 
Protein GI194444411 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value7.531660000000001e-18 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGACCGAGA CGGAGTGTTC TGAACGTTGC GTCGATTTTT TAAAAGAAAC GATGTTTAAT 
TATAATAACG GGGAAATTAC GCTTGCCGCT TTGGGTAATG ATAATCTACC GCCGAGCGAG 
GCAGGTAGTA ATGGAATCTA TGAGGCTTTT GAGCAACGTT TGATAGACTT CCTGACCACG 
CCCGCCACGG CGTCTGGTGA TGAGAGCGGC GCTATTGATC AGACGGATGC ATCACAACCA 
GCGGCAATAG AGGCGTTTAT TAACTCGCCG GAGTTTCAGA AAAATATTCG CATGCGTGAT 
ATTGAAAAAA ATAAAATAGG TAGCGGAAGT TATGGGACAG TCTATCTGTT AAATGATGAG 
TTTGTTGTTA AGATTCCAAT TAATGAGCGG GGAATAAAAG TGGATGTTAA CTCTCCGGAG 
CATCGTAATT GTCATCCTGA TCGTGTCAGT AAGTATTTGA ATATGGCCAA TGACGACAAG 
AATTTTTCTC GTTCGGCCTC CATGAATATT AATGGTAAAG ACGTTACAGT TTTAGTTTCA 
AAATATATTC AAGGTCAGGA GTTCGATATT GAAGATGAAG ATAACTATCG AATGGCGGAG 
GCGCTTCTTG AATCCCGGGG GGTTTATATG CATGATATAG ATAACGTAGG TAATATTCTG 
ATTAAAGAGG GGGTACTTTT CTTTGTCGAT GGCGATCAAA TCGTGCTGTC ACAAGAATCC 
CGGCAACAGC GAAGCGTTTC TCTTGCAACA AGGCAACTGG AAGAGCAAAT TAAGGCCCGT 
TACCTGGTAA AATTAAAGCA GTCCGAGACC GAAGGAAATA CTGAAGATAT TGAATATTAT 
AAGTCACTTA TTACAGAACT TGATGAGTTA ATCGGAGAGG AAGAACAGGC ACCTGCGCCA 
GGAAGACGTT TTAAACTAGC CGCGCCGGAG GAAGGGACTC TTGTGGCTAA GGTATTAAAG 
GATGAATTAA AAAAATAG
 
Protein sequence
MTETECSERC VDFLKETMFN YNNGEITLAA LGNDNLPPSE AGSNGIYEAF EQRLIDFLTT 
PATASGDESG AIDQTDASQP AAIEAFINSP EFQKNIRMRD IEKNKIGSGS YGTVYLLNDE 
FVVKIPINER GIKVDVNSPE HRNCHPDRVS KYLNMANDDK NFSRSASMNI NGKDVTVLVS 
KYIQGQEFDI EDEDNYRMAE ALLESRGVYM HDIDNVGNIL IKEGVLFFVD GDQIVLSQES 
RQQRSVSLAT RQLEEQIKAR YLVKLKQSET EGNTEDIEYY KSLITELDEL IGEEEQAPAP 
GRRFKLAAPE EGTLVAKVLK DELKK