Gene SNSL254_A1705 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A1705 
SymbolyncA 
ID6486210 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp1674691 
End bp1675206 
Gene Length516 bp 
Protein Length171 aa 
Translation table11 
GC content55% 
IMG OID642737085 
Productphosphinothricin acetyltransferase 
Protein accessionYP_002040837 
Protein GI194444449 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1247] Sortase and related acyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.667334 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones73 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGATTC GCTTTGCCGA TAAAGCAGAC TGCGCCGCGA TTACCGAAAT CTATAACCAT 
GCGGTATTAC ATACTGCGGC TATCTGGAAC GATCGGACGG TCGATACGGA TAATCGCCTT
GCCTGGTATG AGGCCCGTCA ATTACTGGGC TATCCGGTGC TGGTAAGCGA AGAAAATGGC
GTGGTGACTG GCTATGCATC ATTTGGCGAC TGGCGCAGTT TCGACGGTTT TCGCTATACC
GTCGAGCACT CGGTTTATGT CCATCCGGCG CACCAGGGGA AAGGACTGGG GCGAAAACTG
CTCAGCAGAC TGATCGATGA AGCCCGACGC TGCGGCAAGC ATGTGATGGT GGCCGGTATT
GAGTCACAGA ATGCCGCCTC GATACGCCTG CATCATTCGC TGGGGTTTAC CGTCACCGCG
CAAATGCCGC AGGTCGGCGT AAAATTTGGC CGTTGGTTAG ATCTTACGTT TATGCAGCTC
CAGCTTGATG AACACGCCGC GCCGGACGCC TGCTGA
 
Protein sequence
MTIRFADKAD CAAITEIYNH AVLHTAAIWN DRTVDTDNRL AWYEARQLLG YPVLVSEENG 
VVTGYASFGD WRSFDGFRYT VEHSVYVHPA HQGKGLGRKL LSRLIDEARR CGKHVMVAGI
ESQNAASIRL HHSLGFTVTA QMPQVGVKFG RWLDLTFMQL QLDEHAAPDA C