Gene SNSL254_A1686 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A1686 
Symbol 
ID6486317 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand+ 
Start bp1650101 
End bp1650982 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content51% 
IMG OID642737066 
Producthypothetical protein 
Protein accessionYP_002040818 
Protein GI194445843 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones65 
Fosmid unclonability p-value0.605003 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACATCAC AAAAAGCAAC GCTAATAGGG CTTGTTGCCA TCGTTCTGTG GAGCACGATG 
GTTGGGTTAA TTCGCGGCGT CAGCGAAGGT CTTGGACCGG TAGGCGGCGC AGCCATGATC 
TATTCATTAA GCGGCCTGCT GCTGATTTTT ACCGTCGGAT TACCTGATAT CCGCCGTTTC 
CCGGGGCGAT ACCTCATCGC AGGCAGCGTA CTGTTTGTCA GTTATGAAAT ATGCCTGGCG 
CTTTCTCTCG GTTATGCCGC CACTCGCCAT CAGGCTATCG AAGTCGGCAT GGTTAACTAT 
TTATGGCCCA GCCTGACCAT TCTGTTTGCC ATTCTTTTTA ATGGGCAAAA AACTAACTGG 
CTTATTGTTC CTGGATTGCT TATTGCACTT ACTGGCGTTT GCTGGGTTCT GGGGGGCGAG 
AATGGTCTTA ATCCAGGAGA AATTATCAGC AATGTCGCCA CCAGTCCGCT AAGTTATTTA 
CTGGCATTTC TTGGGGCGTT TATATGGGCG ACGTACTGCA CGGTCACAAA TAAATATGCG 
CGTGGTTTTA ACGGTATCAC CGTCTTTGTG TTACTCACCG CCGTGGCGCT GTGGTTCCAC 
TATTTTCTTA CGCCGCAACC TGCCATGATA TTTAGCCTAC CGGTGATTGC TAAACTTTTT 
ACCGCGGCAT TAACGTTAGG GTTTGCCTAC GCCGCATGGA ATGTGGGCAT ACTTCATGGC 
AATGTGACTA TCATGGCCGT AGGGTCTTAT TTTACCCCCG TCATGTCCTC TGCTCTGGCC 
GCGCTGTTAC TCAGCTCGCC ACTGTCATTC TCCTTCTGGC AAGGCGCAGT CATGGTTTGC 
GTAGGTTCGC TACTTTGTTG GCTGGCAACG CGGCGGCGCT AA
 
Protein sequence
MTSQKATLIG LVAIVLWSTM VGLIRGVSEG LGPVGGAAMI YSLSGLLLIF TVGLPDIRRF 
PGRYLIAGSV LFVSYEICLA LSLGYAATRH QAIEVGMVNY LWPSLTILFA ILFNGQKTNW 
LIVPGLLIAL TGVCWVLGGE NGLNPGEIIS NVATSPLSYL LAFLGAFIWA TYCTVTNKYA 
RGFNGITVFV LLTAVALWFH YFLTPQPAMI FSLPVIAKLF TAALTLGFAY AAWNVGILHG 
NVTIMAVGSY FTPVMSSALA ALLLSSPLSF SFWQGAVMVC VGSLLCWLAT RRR