Gene SNSL254_A1659 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A1659 
Symbol 
ID6486725 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp1623639 
End bp1624127 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content49% 
IMG OID642737044 
ProductMarR family transcriptional regulator 
Protein accessionYP_002040796 
Protein GI194445689 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones70 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAGAAA ATAAAAATGT GCAAGATACA CATATTTCCG AGCAAATGAA GGCGCTTCAC 
GGTGCGTTGA TTCGCGTGGT GAGCGCGCTC AACCGGCCTC GTAATGATGA GAAATTAATT
GCAGAGGCGG GCATTCAACT CGATCGCGCG CTATTTTCGA TCCTTATTAG TATCGAACGT
TTAGGGCCGA TTGGCGTTGT TGAGTTAGCC GAACGTGCCG GTCGTGATTA TACGACGGTA
AGCCGACAGG TCGCCAAACT GGAGAAGCTG GGGTTGATAA TACGGCAGCA TAATGCCATC
GATCGTCGTA TACGCGAGGC CGTTATCTCC CGTACAGGAA AGGCGATGAC GGAGCGTATA
GACGCTGCGC GAGAGCAAAT GGGCAAAGTT GTTTTTAAAG ACTGGCCTCA GGATGAACTT
GATGTTTTTG TTCGGCTAAT GCAAAAGTTT GCCGATGCAA TGGATAGCGA TGCTTCAATG
CCGGAATAA
 
Protein sequence
MSENKNVQDT HISEQMKALH GALIRVVSAL NRPRNDEKLI AEAGIQLDRA LFSILISIER 
LGPIGVVELA ERAGRDYTTV SRQVAKLEKL GLIIRQHNAI DRRIREAVIS RTGKAMTERI
DAAREQMGKV VFKDWPQDEL DVFVRLMQKF ADAMDSDASM PE