Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A1657 |
Symbol | |
ID | 6483557 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | - |
Start bp | 1620855 |
End bp | 1622096 |
Gene Length | 1242 bp |
Protein Length | 413 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 642737042 |
Product | major facilitator superfamily MFS_1 |
Protein accession | YP_002040794 |
Protein GI | 194444944 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.992815 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 68 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATACTA ATGTCTATGA GAACACCGAC AGCGAAACTA TCACCCCGCT CAACAAGCGG CGTATTTTGC CTGTTTTCCT GCTTGTCGGC CTTTACGCCG CCAGTACAGC GGCTGTAATG TCGGTACTGC CTTTTTATAT CCGCGAGATG GGCGGTTCGC CGCTTATCAT TGGAATCATC ATCGCCACTG AAGCTTTTAG CCAATTTTGT GCGGCGCCCC TGATTGGCCA CCTTTCCGAT CGCGTTGGCC GCAAGCGAAT ATTGATTGTC ACGCTGGCTA TTGCGGCGAT AAGTTTACTA TTACTCGCCA ACGCGCAATG TATCCTGTTT ATCCTGCTCG CCCGCACGCT TTTTGGCATT AGCGCCGGGA ATTTGTCAGC CGCCGCAGCC TATATTGCCG ATTGTACGCA CGTCAGAAAT CGGCGTCAGG CAATCGGTAT CCTCACAGGC TGCATTGGTT TAGGCGGTAT TGTCGGGGCA GGCGTTTCCG GGTGGTTATC GCGTATCAGT CTGAGCGCGC CGATCTACGC CGCCTTTATA CTTGTCCTTG GGTCTGCCCT GGTCGCGATT TGGGGGTTAA AAGACCCTTC CACAACATCA CGTACCACAG ATAAAATAGC GGCGTTCTCT GCCCGCGCTA TTTTAAAGAT GCCTGTCCTT CGCGTCTTAA TCATCGTAAT GCTTTGTCAT TTCTTCGCCT ATGGCATGTA CTCTTCACAA TTACCTGTTT TTCTTTCTGA CACCTTCATC TGGAATGGGC TTCCCTTTGG GCCAAAAGCG TTAAGCTATC TGTTAATGGC GGACGGGGTT ATTAATATTT TCGTTCAGCT ATTTCTGTTA GGTTGGGTGA GCCAATATTT TTCGGAGCGA AAGCTAATTA TCCTCATCTT CGCCCTTCTT TGTACTGGAT TTCTCACTGC GGGTATCGCC ACGACCATAC CTGTGCTTGT TTTTGCTATC GTTTGTATTA GCATCGCTGA TGCGCTAGCC AAACCCACTT ATCTTGCCGC CTTGTCCGTC CATGTATCGC CTGCCCGACA AGGTATCGTC ATCGGAACGG CGCAGGCATT AATCGCAATC GCTGATTTTA TATCCCCCGT ATTGGGCGGA TTTGTCCTGG GTTATGCTCT GTATGGCGTC TGGATCGGTA TAGCTATCTC TGTCGCCATT ATTGGTCTGG TGACGGCAAT GATTTACCTT TCAAAAAGTT CACCGCTAAT AGTGAAACCA GAAACAGAAT AA
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Protein sequence | MNTNVYENTD SETITPLNKR RILPVFLLVG LYAASTAAVM SVLPFYIREM GGSPLIIGII IATEAFSQFC AAPLIGHLSD RVGRKRILIV TLAIAAISLL LLANAQCILF ILLARTLFGI SAGNLSAAAA YIADCTHVRN RRQAIGILTG CIGLGGIVGA GVSGWLSRIS LSAPIYAAFI LVLGSALVAI WGLKDPSTTS RTTDKIAAFS ARAILKMPVL RVLIIVMLCH FFAYGMYSSQ LPVFLSDTFI WNGLPFGPKA LSYLLMADGV INIFVQLFLL GWVSQYFSER KLIILIFALL CTGFLTAGIA TTIPVLVFAI VCISIADALA KPTYLAALSV HVSPARQGIV IGTAQALIAI ADFISPVLGG FVLGYALYGV WIGIAISVAI IGLVTAMIYL SKSSPLIVKP ETE
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