Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A1594 |
Symbol | |
ID | 6485520 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | - |
Start bp | 1560430 |
End bp | 1561251 |
Gene Length | 822 bp |
Protein Length | 273 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 642736980 |
Product | peptidase S1 and S6 chymotrypsin/Hap |
Protein accession | YP_002040732 |
Protein GI | 194444783 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG3591] V8-like Glu-specific endopeptidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 70 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCATAAAA CCATTGCTGT ATTACTGGGC ATAGTGTGTT TTTTACCGGT TATGGCGAAA GCCAGGGGGG CTGAAACAGA CGCCACGGAT GCCAGCGACG TCAAAACGCT TTTTTTTAAC CATGATGATC GGGTGCCCGT CGCCGATCCT ACCCAATCGC CGTGGGATGC CATCGGGCAA CTAGAGACCG CCAGCGGTAA TTTGTGTACG GCAACGCTTA TCTCCCCGCA TATCGCCCTG ACAGCAGGTC ACTGCCTGCT AACGCCACCG AAAGGAAAAC CAGACAAGGC GGTTGCGCTG CGTTTTGTGG CGCGAAAAGG AGTATGGCGC TATGAAATCC ACGGCATTGA AGGCCGCGTT GAACCGTCGC TGGGCCGACG CCTGAAAGCG GATGGCGATG GCTGGATTGT GCCGCCTGCC GCGGCAAGCT GGGATTTTGG TCTGGTAATA TTGCGCTACC CACCTTCCGG TATCACGCCA GTGCCTTTAT TTACCGGCGA TAAAGCGGCG CTCACTGCGG CGTTGAAAGC CGCAGACCGA ATAGTCACGC AGTCCGGTTA TCCGGAAGAT CATCTGAATG CGCTCTATTC CCATCAGGAT TGCGTCGTGA CCGGCTGGGC GCAGAATGCC GTACTCTCAC ACCAGTGCGA CACGTTACCT GGCGACAGCG GCTCGCCGCT CTTATTGCAC ACGGATAGCG GATGGCAGCT CATTGGCGTA CAAAGCTCCG CCCCTGCGGC TAAAGATCGC TGGCGCGCCG ATAACCGCGC TATATCCGTC ACCGGCTTTC GCGATAAGCT GAAAGCTCTG GCGCAGGATT AA
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Protein sequence | MHKTIAVLLG IVCFLPVMAK ARGAETDATD ASDVKTLFFN HDDRVPVADP TQSPWDAIGQ LETASGNLCT ATLISPHIAL TAGHCLLTPP KGKPDKAVAL RFVARKGVWR YEIHGIEGRV EPSLGRRLKA DGDGWIVPPA AASWDFGLVI LRYPPSGITP VPLFTGDKAA LTAALKAADR IVTQSGYPED HLNALYSHQD CVVTGWAQNA VLSHQCDTLP GDSGSPLLLH TDSGWQLIGV QSSAPAAKDR WRADNRAISV TGFRDKLKAL AQD
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