Gene SNSL254_A1570 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A1570 
Symbol 
ID6482861 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand- 
Start bp1534446 
End bp1534919 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content51% 
IMG OID642736957 
Productinner membrane protein YdgK 
Protein accessionYP_002040709 
Protein GI194445863 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones57 
Fosmid unclonability p-value0.126281 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGTTA ATGCGCGTAA CCCCGGAGAA GATATGACTA CAACACCGCC ACAACGAATT 
GGAGGCTGGC TTCTTGGCCC GTTAGCCTGG CTGTTAGTCG CGTTGTTGAG CGCCTCGCTG 
GCGTTATTAC TCTACGTTAT GGCGCTTGCC ACACCGCAAA CGTTCAAGAC GCTTAGCGGA 
CAGGAAACCG GTAATTTACT GCTATGGGGC ATTTCATTTA TTACCGCTAT CGCCATGTGG 
TACTATACCC TGTGGTTGAC GATCGCATTC TTCAAGCGCA GACGCTGCGT GCCGAAGCAT 
TACATTATCT GGCTGCTGGT GTCGGTGTTA CTGGCGGTTA AAGCATTTGC CTTTTCGCCC 
GTCTCAGATG CCTTTGCCGT GCGTCAGTTA CTCTTCCCAC TGTTGGCAAC GGCGCTCATT 
GTGCCTTATC TCAAACGTTC AGCGCGCGTT AAAACAACGT TTGTTAATCC GTAA
 
Protein sequence
MTVNARNPGE DMTTTPPQRI GGWLLGPLAW LLVALLSASL ALLLYVMALA TPQTFKTLSG 
QETGNLLLWG ISFITAIAMW YYTLWLTIAF FKRRRCVPKH YIIWLLVSVL LAVKAFAFSP 
VSDAFAVRQL LFPLLATALI VPYLKRSARV KTTFVNP