| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A1567 |
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| Symbol | |
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| ID | 6484084 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011080 |
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| Strand | - |
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| Start bp | 1531010 |
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| End bp | 1533217 |
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| Gene Length | 2208 bp |
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| Protein Length | 735 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 642736954 |
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| Product | electron transport complex protein RnfC |
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| Protein accession | YP_002040706 |
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| Protein GI | 194443713 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG4656] Predicted NADH:ubiquinone oxidoreductase, subunit RnfC |
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| TIGRFAM ID | [TIGR01945] electron transport complex, RnfABCDGE type, C subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 50 |
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| Fosmid unclonability p-value | 0.0379557 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTAAAC TATTTTCCGC TTTCAGAAAA GATAAAATCT GGGATTTCGA CGGTGGTATT
CATCCGCCCG AAATGAAGTC CCAGTCAAAC GGCACGCCGC TGCGCCAGGT GCCTTTAGCG
CCGCGCTTTG TTATCCCTTT AAAACAGCAC ATTGGTGCTG AGGGCGAGCT GTGCGTTAGC
GTCGGCGATC GCGTGCTACG CGGCCAGGCG CTTACCCGTG GACGTGGGAG AATGCTGCCG
GTACACGCGC CCACCTCCGG GACGGTTATC GCTATTGCCC CCCACTCGAC GGCACATCCT
TCGGCGCTGG CGGAGTTAAG CGTCATCATT GATGCCGACG GCGAGGACCG CTGGATTGAA
CGCGAGGGCT GGTCTGATTA CCGCGCCCAC AGCCGTGAAG CGCTCATTGA ACGCATTCAT
CAGTATGGCG TTGCCGGGCT TGGCGGCGCA GGGTTTCCCA CCGGCGTTAA ATTGCAGGGC
GGCGGCGATA AAATCACCAC GCTTATTATC AATGCCGCAG AGTGCGAACC TTACATTACG
GCGGACGATC GTCTGATGCA GGACTGCGCC GCGCAGATTG TGGAAGGTAT TCGCATCCTG
GCGCATATTC TGCAACCGCG TGAGGTATTA ATCGGCATTG AAGATAACAA ACCGCAGGCT
ATTTCCATGC TGCGCGCCGT ACTGGCTGAC GCCCACGATA TTTCGTTACG TGTGATCCCA
ACCAAATACC CTTCCGGCGG CGCAAAACAG CTCACCCAAA TACTGACGGG AAAACAGGTT
CCCCACGGCG GGCGCTCCTC TGATATTGGC GTGCTGATGC AAAACGTCGG TACGGCGTAT
GCCGTTAAAC GCGCCGTGAT TGACGGCGAA CCGATCACAG AACGCGTCGT CACCTTAACG
GGTGAAGCGG TAAGCCGCCC GGGTAACGTC TGGGCGCGGC TCGGCACTCC CGTTCGTCAT
TTGCTTAACG ATGCCGGGTT CTGCCCTTCT GCTGACCAGA TGGTCATCAT GGGCGGCCCG
TTGATGGGAT TCACCCTTCC CTGGCTTGAC GTACCGGTCG TAAAAATCAC CAATTGCCTG
CTGGCGCCAT CCGTGACTGA AATGGGAGCG CCTCAGGAAG AGAAAAGCTG TATTCGTTGC
AGCGCTTGCG CTGACGCTTG CCCTGCCGAC CTTTTACCGC AGCAGCTTTA TTGGTTCAGC
AAAGGGCAGC AGCATGACAA GGCTACCGCT CACCATATTG CTGATTGTAT AGAATGCGGC
GCCTGCGCCT GGGTCTGCCC CAGTAATATT CCGCTCGTCC AATATTTCCG TCAGGAAAAA
GCGGAGATTA ATGCGATCAG GCTTGAAGAA AAACGCGCCG CCGAAGCCAA AGCGCGTTTT
GAGGCTCGTC AGGCAAGACT GGAGCGCGAA AAAGCCGCCC GCCTTGCACG TCATAAGAGC
GCAGCGGTAC AACCAGCGGC AAAAGATCAG GATGCCATTG CCGCTGCGCT GGCGCGGGTA
AAAGAGAAAC AGGCGCAGGC CACGCAACCG GTGGTTATTC AGGCGGGTAG TCTGCCAGAC
AATAGCGCCG TCATCGCGGC CCGTGAAGCG CGTAAAGCGC AAGCGCGCGC TAAACAAGCC
GCTCATCCGG TGGCTGACAG CGCGATATCC GGCGGCGACC CGCGTAAAGC CGCAGTGGAG
GCGGCTATCG CCCGCGCCAA AGCCCGCAAA CAGGAGCAGC AGGCCGGAAG CGAACCTGCC
GAACCGGTCG ATCCGCGCAA AGCCGCGGTG GAGGCGGCTA TCGCCCGCGC CAAAGTCCGC
AAACAGGAGC AGCAGGCCGG AAGCGAACCT GCCGAACCGG TCGATCCGCG TAAAGCCGCG
GTGGAAGCGG CCATCGCCCG CGCCAAAGCC CGTAAGCACG AGCAGCAGGC CGGAAGCGAA
CCTGCCGAAC CGGCCGACCC GCGTAAAGCC GCGGTGGAAG CGGCTATCGC CCGCGCCAAA
GCCCGTAAGC AGGAGCAGCA GGCCGGAAGC GAACCTGCCG AACCGGTCGA TCCGCGTAAA
GCCGCGGTGG AAGCGGCCAT CGCCCGCGCC AAAGCTCGTA AACAGGAGCA GCAGGCCGGA
AGCGAACCTG CCGAACCGGC CGACCCGCGT AAAGCCGCGG TTGCTGCGGC TATCGCCCGC
GTTCAGGCAA AAAAAGCAGC ACAGCAGCAG GTTGTTAACG AGGATTAA
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| Protein sequence | MLKLFSAFRK DKIWDFDGGI HPPEMKSQSN GTPLRQVPLA PRFVIPLKQH IGAEGELCVS
VGDRVLRGQA LTRGRGRMLP VHAPTSGTVI AIAPHSTAHP SALAELSVII DADGEDRWIE
REGWSDYRAH SREALIERIH QYGVAGLGGA GFPTGVKLQG GGDKITTLII NAAECEPYIT
ADDRLMQDCA AQIVEGIRIL AHILQPREVL IGIEDNKPQA ISMLRAVLAD AHDISLRVIP
TKYPSGGAKQ LTQILTGKQV PHGGRSSDIG VLMQNVGTAY AVKRAVIDGE PITERVVTLT
GEAVSRPGNV WARLGTPVRH LLNDAGFCPS ADQMVIMGGP LMGFTLPWLD VPVVKITNCL
LAPSVTEMGA PQEEKSCIRC SACADACPAD LLPQQLYWFS KGQQHDKATA HHIADCIECG
ACAWVCPSNI PLVQYFRQEK AEINAIRLEE KRAAEAKARF EARQARLERE KAARLARHKS
AAVQPAAKDQ DAIAAALARV KEKQAQATQP VVIQAGSLPD NSAVIAAREA RKAQARAKQA
AHPVADSAIS GGDPRKAAVE AAIARAKARK QEQQAGSEPA EPVDPRKAAV EAAIARAKVR
KQEQQAGSEP AEPVDPRKAA VEAAIARAKA RKHEQQAGSE PAEPADPRKA AVEAAIARAK
ARKQEQQAGS EPAEPVDPRK AAVEAAIARA KARKQEQQAG SEPAEPADPR KAAVAAAIAR
VQAKKAAQQQ VVNED
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