| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A1562 |
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| Symbol | tppB |
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| ID | 6485018 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011080 |
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| Strand | - |
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| Start bp | 1525890 |
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| End bp | 1527395 |
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| Gene Length | 1506 bp |
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| Protein Length | 501 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 642736949 |
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| Product | putative tripeptide transporter permease |
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| Protein accession | YP_002040701 |
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| Protein GI | 194445255 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3104] Dipeptide/tripeptide permease |
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| TIGRFAM ID | [TIGR00924] amino acid/peptide transporter (Peptide:H+ symporter), bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0485322 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 55 |
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| Fosmid unclonability p-value | 0.102163 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCTACTG CAAACAAAAA ACCAACTGAA AGCGTCAGTT TGAACGCTTT CAAACAACCG
AAGGCGTTCT ATCTCATCTT CTCGATAGAG TTATGGGAGC GTTTTGGTTA TTACGGCCTG
CAAGGCATTA TGGCCGTCTA CCTGGTAAAA CAACTGGGTA TGTCAGAAGC GGATTCCATC
ACCCTTTTCT CTTCCTTCAG TGCGCTGGTG TACGGCCTGG TCGCCATTGG CGGTTGGTTA
GGTGATAAAA TTCTGGGCAC CAAACGCGTT ATTATGTTGG GTGCCGTGGT GCTGGCTATC
GGTTATGCGC TGGTCGCATG GTCTGGTCAT GACGCTGGCA TCGTCTATAT GGGCATGGCG
GCTATCGCTG TGGGTAACGG TCTGTTTAAA GCTAACCCGT CTTCCCTGCT GTCTACCTGC
TACGCGAAGG ATGATCCGCG TCTCGACGGC GCATTTACGA TGTATTATAT GTCCGTCAAC
ATCGGCTCCT TCTTCTCTAT GCTGGCGACG CCGTGGCTGG CGGCGCGTTA TGGCTGGAGC
ACCGCGTTTG CGCTTAGTGT CGTCGGTATG CTGATAACCG TCGTTAACTT TGCTTTCTGC
CAGCGCTGGG TAAAAAGCTA CGGTTCCAAA CCCGACTTTG AACCGATCAA CTTCCGTAAT
CTGCTGCTGA CCATCGTGGG TATTGTCGTT CTGATTGCGG TCGCCACCTG GCTGCTGCAC
AACCAGGATA TCGCGCGTAT GGTGCTGGGC GTAATCGCTC TTGGCATCGT CATTATCTTC
GGTAAAGAAG CGTTTTCCAT GCACGGCGCG GCGCGCCGTA AAATGATCGT CGCCTTTATT
TTGATGCTGC AGGCGATTAT CTTCTTCGTA CTGTACAGCC AGATGCCGAC GTCGCTGAAC
TTCTTTGCCA TTCGTAACGT CGAGCACTCT ATTCTCGGTA TCGCGTTCGA ACCGGAACAG
TATCAGGCGC TGAACCCATT CTGGATCATT ATCGGCAGCC CGATTCTGGC CGCTATTTAT
AACAGGATGG GCGATACGCT GCCGATGCCG ATGAAATTCG CCATTGGTAT GGTGCTGTGT
TCCGGCGCGT TCCTGATTCT GCCGCTGGGC GCCAAATTTG CGAACGATGC CGGCATCGTA
TCCGTAAACT GGCTGATCGC AAGCTACGGC CTGCAAAGTA TCGGTGAGCT GATGATCTCC
GGTCTGGGCC TAGCAATGGT CGCACAGTTG GTTCCGCAGC GTCTGATGGG CTTCATCATG
GGTAGCTGGT TCCTGACAAC GGCAGGCGCT AACATCATCG GCGGTTATGT CGCCAACCTG
ATGGCTGTGC CGAGCGACGT GACTGACCCA CTGATGTCCC TGGAAGTCTA TGGTCGCGTA
TTTATGCAGA TTGGCATAGC AACCGCCGTT ATCGCCGTCC TGATGCTGCT GACAGCGCCT
AAGCTGAACC GTATGACCCA GGACGATGAT ACCGCTGAAA AAGGCTCTAA AGCCGCTACA
GTTTAA
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| Protein sequence | MSTANKKPTE SVSLNAFKQP KAFYLIFSIE LWERFGYYGL QGIMAVYLVK QLGMSEADSI
TLFSSFSALV YGLVAIGGWL GDKILGTKRV IMLGAVVLAI GYALVAWSGH DAGIVYMGMA
AIAVGNGLFK ANPSSLLSTC YAKDDPRLDG AFTMYYMSVN IGSFFSMLAT PWLAARYGWS
TAFALSVVGM LITVVNFAFC QRWVKSYGSK PDFEPINFRN LLLTIVGIVV LIAVATWLLH
NQDIARMVLG VIALGIVIIF GKEAFSMHGA ARRKMIVAFI LMLQAIIFFV LYSQMPTSLN
FFAIRNVEHS ILGIAFEPEQ YQALNPFWII IGSPILAAIY NRMGDTLPMP MKFAIGMVLC
SGAFLILPLG AKFANDAGIV SVNWLIASYG LQSIGELMIS GLGLAMVAQL VPQRLMGFIM
GSWFLTTAGA NIIGGYVANL MAVPSDVTDP LMSLEVYGRV FMQIGIATAV IAVLMLLTAP
KLNRMTQDDD TAEKGSKAAT V
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