Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A1499 |
Symbol | |
ID | 6485569 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | + |
Start bp | 1470794 |
End bp | 1472542 |
Gene Length | 1749 bp |
Protein Length | 582 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 642736886 |
Product | sensor-kinase |
Protein accession | YP_002040640 |
Protein GI | 194442537 |
COG category | [P] Inorganic ion transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG3221] ABC-type phosphate/phosphonate transport system, periplasmic component [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.0000000587634 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGTTGGCGG CAGTAGGGCT ACTTTGTCAT GGCGCGTGGG CAGGGACGTG GAATATCGGT ATTTTGGCCA TGCGCGGCGA GGCGTCTACG CGTAGCCACT GGCAACCCTT GGCAAAGACA TTAAGCCAAC AGCTTCCAGG CGAAACCTTT CACATCCAGC CGCTGGATCT GCATCAAATG CAGGAGGCTG TTAACCAGGG AACCGTGCAG TTTGTGATAA CCAACCCGGC GCAATTTGTC CAACTGAACA GCCATGCGCC GCTGCGCTGG TTAGCTTCCC TGCGCTCCAC GCGCGATGGG AAAGCAGTGA GTAATGTTAT TGGCAGCGTG ATTTTGACCC GACGCGATAG CGGCATCACC ACGGCGCATG ATCTCATCGG TAAGACCGTC GGCGCGATTG ATGCTCAGGC GTTTGGCGGC TATTTATTAG GCTATAAAGC GCTCAGCGAC GCGGGCTTAC GCCCGGAGCG CGATTTTCAT CTCCGTTTTA CCGGATTTCC TGGCGATGCC TTAGTCTATA TGCTGCGCGA AAAAGCGGTG CAGGCGGCAA TTGTGCCAGT GTGCCTGTTA GAAAATATGG ATCAGGAAGG ATTGATTAAT AAAAAGGACT TTATCGCGCT GCTTTCCCGA CCGACGCCCC TGCCTTGCTT AACCAGTACG CCGTTATATC CTGACTGGTC GTTCGCGGCG CTACCTGCGG TAAGCGATGC GCTGGCGGAT CGCGTAACGC GAGCGCTATT CAACGCGCCC GCCGCCGCGT CATTTCACTG GGGCGCGCCT GCGTCCACCA GTCAGGTGGA AGCCTTGCTG CGTGATGTTC GTCAGCACCC TCAGCAGCGT CGACTGTGGC TGGATGTCAA AAGTTGGTTA ATCCAGCACC AGCTAATGGT CGGCGGCGTG ATTCTGGCGT TCCTGTTGCT CACGCTCAAT TATATTTGGG TCATGCTGCT GGTGCGTCGA CGTGGAAAGC AACTGGAACG TAATAGCGTA GTTCTTCATC AGCATGAGCG GGCGCTGGAA ACCGCCCGGC AAATGAGCGT GTTGGGTGAA ATGACCTCCG GGTTTGCCCA TGAGCTTAAT CAGCCGCTTT CCGCGATTCG ACATTATGCC CAGGGGTGCC TGATTCGACT GCGCGCTGCA GATGAACAGC ATCCCTTGCT GCCAGCGCTG GAGCAGATTG ACCAGCAGGC GCAACGCGGT GCGGATACTC TGCGTAACCT GCGTCACTGG GTCAGCCAGG CGCAGGGCAA CCCGGTGCTA ACCGAAGCGT GGAAGGCCAT AGCCATTCGG GAGGCGATTG ATCATGTCTG GCAATTGTTG CGTATGGCGC AACAGTTTCC GACAGTGACT CTGCATACCG AGGTTAGCGC TGCGCTGCGC GTAACTCTGC CGTCAGTGCT GCTGGAACAG GTGCTGGCGA ATATCATTCT TAATGCGGCT CAGGCGGGCG CCACCCATTT ATGGGTCGTT GCTGAACGCA CTGAAAACGG CATCAGTATC GCTTTACAGG ATAACGCCGG GGGAATCGAT GAGGCGCTAT TACGTCAGGC GTTTCAGCCG TTTATGACCA CCCGCAAAGA GGGGATGGGC TTAGGGCTGG CGATTTGCCA GCGGCTGGTG CGGTATGGGC GGGGCGATAT CAGTATCAGG AACCAGACCG CGCCGGACGG TCTGTCGGGA ACGGTGGTCA CGATACATTT CTTACATGAA AATGGGGGCA GGGATGGCGA CAATTCATCT ACTGGATGA
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Protein sequence | MLAAVGLLCH GAWAGTWNIG ILAMRGEAST RSHWQPLAKT LSQQLPGETF HIQPLDLHQM QEAVNQGTVQ FVITNPAQFV QLNSHAPLRW LASLRSTRDG KAVSNVIGSV ILTRRDSGIT TAHDLIGKTV GAIDAQAFGG YLLGYKALSD AGLRPERDFH LRFTGFPGDA LVYMLREKAV QAAIVPVCLL ENMDQEGLIN KKDFIALLSR PTPLPCLTST PLYPDWSFAA LPAVSDALAD RVTRALFNAP AAASFHWGAP ASTSQVEALL RDVRQHPQQR RLWLDVKSWL IQHQLMVGGV ILAFLLLTLN YIWVMLLVRR RGKQLERNSV VLHQHERALE TARQMSVLGE MTSGFAHELN QPLSAIRHYA QGCLIRLRAA DEQHPLLPAL EQIDQQAQRG ADTLRNLRHW VSQAQGNPVL TEAWKAIAIR EAIDHVWQLL RMAQQFPTVT LHTEVSAALR VTLPSVLLEQ VLANIILNAA QAGATHLWVV AERTENGISI ALQDNAGGID EALLRQAFQP FMTTRKEGMG LGLAICQRLV RYGRGDISIR NQTAPDGLSG TVVTIHFLHE NGGRDGDNSS TG
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