Gene SNSL254_A1478 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A1478 
Symbol 
ID6484390 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp1448972 
End bp1449382 
Gene Length411 bp 
Protein Length136 aa 
Translation table11 
GC content57% 
IMG OID642736868 
Producthypothetical protein 
Protein accessionYP_002040622 
Protein GI194446601 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG2050] Uncharacterized protein, possibly involved in aromatic compounds catabolism 
TIGRFAM ID[TIGR00369] uncharacterized domain 1 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.301889 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value0.0000119819 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
TTGATCTGGA AACGTGAAGT GACCCTCGAT GCGCTTAATG CGATGGGGGA AGGGAATATG 
GTTGGCCTGC TTGATATCCG CTTTGAGCGT ATTGGGGACG ATACGCTGGA AGCGACAATG
CCCGTCGATC ATCGCACCAA ACAGCCGTTC GGCTTGCTGC ATGGCGGAGC GTCTGTGGTG
CTGGCGGAAA GTATCGGCTC GGTCGCAGGC TATCTGTGTA CGCAGGGGGA GCAAAAGGTG
GTGGGGCTGG AGGTGAATGC CAACCATGTA CGGTCGGCGC GTCAGGGGCG CGTACGAGGC
GTCTGTAAAG CGTTGCATAC CGGGGCTCGC CATCAGGTCT GGCAGATAGA GATCTTTGAT
GAACAGGGAC GTCTGTGCTG TTCTTCGCGT CTTACTACGG CGATTGTGTG A
 
Protein sequence
MIWKREVTLD ALNAMGEGNM VGLLDIRFER IGDDTLEATM PVDHRTKQPF GLLHGGASVV 
LAESIGSVAG YLCTQGEQKV VGLEVNANHV RSARQGRVRG VCKALHTGAR HQVWQIEIFD
EQGRLCCSSR LTTAIV