| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A1470 |
|---|
| Symbol | aroD |
|---|
| ID | 6482584 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011080 |
|---|
| Strand | - |
|---|
| Start bp | 1439032 |
|---|
| End bp | 1439763 |
|---|
| Gene Length | 732 bp |
|---|
| Protein Length | 243 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 642736861 |
|---|
| Product | 3-dehydroquinate dehydratase |
|---|
| Protein accession | YP_002040615 |
|---|
| Protein GI | 194442400 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0710] 3-dehydroquinate dehydratase |
|---|
| TIGRFAM ID | [TIGR01093] 3-dehydroquinate dehydratase, type I |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.21823 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 51 |
|---|
| Fosmid unclonability p-value | 0.0154029 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGTTGGCG AAGGCGCGCC AAAGATCATT GTGTCGCTAA TGGGAAAAAC CATTACCGAT
GTGAAATCGG AAGCACTCGC CTACCGTGAA GCGGATTTCG ATATTCTGGA GTGGCGCGTT
GACCATTTTG CCAACGTGAC AACGGCGGAA AGCGTACTTG AGGCCGCCGG CGCCATCCGG
GAGATTATCA CCGATAAACC CTTGCTATTT ACCTTCCGCA GCGCGAAAGA AGGCGGCGAA
CAGGCACTAA CCACCGAACA GTATATCGCT CTGAATCGTG CAGCGGTTGA CAGCGGTCTG
GTCGATATGA TCGATCTTGA GCTTTTTACC GGCGACGATG AGGTGAAAGC CACCGTCGGC
TATGCTCATC AACACAATGT TGCGGTGATC ATGTCTAACC ATGATTTTCA TAAAACGCCC
GCAGCGGAAG AGATTGTTCA GCGTCTGCGT AAAATGCAGG AACTGGGCGC CGATATTCCG
AAGATCGCCG TCATGCCACA GACTAAAGCC GATGTCCTGA CCTTACTTAC CGCCACTGTA
GAAATGCAGG AGCGCTATGC GGATCGTCCG ATTATTACCA TGTCGATGTC GAAAACCGGG
GTAATATCTC GTCTTGCCGG CGAAGTGTTC GGTTCTGCGG CAACGTTTGG CGCGGTGAAA
AAAGCATCTG CGCCGGGACA AATATCGGTA GCCGATCTGC GTACCGTATT AACTATATTG
CACCAGGCGT AA
|
|---|
| Protein sequence | MVGEGAPKII VSLMGKTITD VKSEALAYRE ADFDILEWRV DHFANVTTAE SVLEAAGAIR
EIITDKPLLF TFRSAKEGGE QALTTEQYIA LNRAAVDSGL VDMIDLELFT GDDEVKATVG
YAHQHNVAVI MSNHDFHKTP AAEEIVQRLR KMQELGADIP KIAVMPQTKA DVLTLLTATV
EMQERYADRP IITMSMSKTG VISRLAGEVF GSAATFGAVK KASAPGQISV ADLRTVLTIL
HQA
|
|---|
| |