Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A1419 |
Symbol | astE |
ID | 6483801 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | + |
Start bp | 1389223 |
End bp | 1390191 |
Gene Length | 969 bp |
Protein Length | 322 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 642736811 |
Product | succinylglutamate desuccinylase |
Protein accession | YP_002040565 |
Protein GI | 194444440 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2988] Succinylglutamate desuccinylase |
TIGRFAM ID | [TIGR03242] succinylglutamate desuccinylase |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.585114 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 80 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATAACT TTCTGGCGTT GACGCTAAGC GGCACGACAC CACGGGTGAG GCAGGGGAAG AGCGCGGGTT TTCGCTGGCG CTGGTTAGGC CATGGTCTGC TTGAACTCAC GCCCGATGCG CCGGTCGACC GCGCGTTAAT TCTTTCTGCG GGGATACATG GCAATGAAAC CGCGCCGGTC GAGATGCTGG ATAAGCTGCT ATCGGCGCTG TATTCAGGCA GCTTGACGTT AACGTGGCGA GTGCTGGTGG TACTCGGCAA TCCGCAGGCG CTGGCGGCGG GAATACGCTA TTGTCACAGC GATATGAACC GTATGTTTGG CGGGCGTTGG CAGTCCTTTG CCGAAAGCGA TGAAACGCGG CGGGCGCGTG AGCTGGAGCT AAGTCTGGAG ACCTTCTTTT CATCTGGCCA GGCGCGGGTA CGCTGGCATC TGGATCTGCA TACCGCCATT CGTGGCTCGC ATCATTTGCG TTTTGGCGTA TTGCCGCAGC GCGACCGCCC GTGGGAGGCG GATTTTCTGG CGTGGCTGGG CGCGGCAGGA CTGGAGGCGT TGGTATTTCA TCAGGCGCCC GGCGGTACGT TTACGCACTT TAGCTCTGAA CATTTCGGCG CGCTTTCCTG CACCCTGGAG TTGGGAAAGG CGTTGCCGTT TGGGCAAAAC GATCTGACGC AGTTCAGCGT AACCTCGCAG GCGTTGTCGG CGCTGCTGAG CGGTGTCGAA ACGTCAACCT CGTCTTCGCC GCCGCTACGC TATCGGGTGG TGTCGCAAAT CACGCGTCAC AGCGACAAGT TCGCGCTTTA TATGGATGCG CAAACGCTGA ATTTTACTGC CTTTGCGAAG GGAACGTTGC TGGCCGAGGA GGGGGATAAG CGCGTGACGG TGACGCATGA CGTTGAATAT GTTCTTTTTC CTAATCCCGC TGTCGCCTGC GGATTGCGGG CTGGATTAAT GCTGGAAAGA CTGCCCTGA
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Protein sequence | MDNFLALTLS GTTPRVRQGK SAGFRWRWLG HGLLELTPDA PVDRALILSA GIHGNETAPV EMLDKLLSAL YSGSLTLTWR VLVVLGNPQA LAAGIRYCHS DMNRMFGGRW QSFAESDETR RARELELSLE TFFSSGQARV RWHLDLHTAI RGSHHLRFGV LPQRDRPWEA DFLAWLGAAG LEALVFHQAP GGTFTHFSSE HFGALSCTLE LGKALPFGQN DLTQFSVTSQ ALSALLSGVE TSTSSSPPLR YRVVSQITRH SDKFALYMDA QTLNFTAFAK GTLLAEEGDK RVTVTHDVEY VLFPNPAVAC GLRAGLMLER LP
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