Gene SNSL254_A1397 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A1397 
Symbol 
ID6485341 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp1366081 
End bp1366905 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content50% 
IMG OID642736789 
ProductMltA-interacting protein 
Protein accessionYP_002040543 
Protein GI194443755 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3713] Outer membrane protein V 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value0.000401837 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
TTGTGTAAAA TAGTTGGGCT TACAGGTATT GGCGGTTACA CTTTTGCCGC AGAACATTTG 
AATAAGGAAT TATGGATTGT GACCAAACTT AAACTTCTGG CTCTTGGCGT GTTTATTGCA
ACATCCGCCA GCGTCGCGCA CGCTGAAAGC AACCTGACGT TGGGCGCAGG CGTTGGTGTG
GTTGAACACC CTTATAAAGA TTACGATAGC GATGTTTATC CGATACCGGT CATCGCTTAT
GAAAGCGAAA ACTTCTGGTT CCGTGGTCTG GGCGGCGGGT ATTACTTGTG GAATGACAAT
GCCGATAAGT TGTCAATCAT GGCATACTGG TCCCCGATGT ACTTCAAACC GGGCGACAGC
GATGACCATC AGTTGCGTCG TCTGGACAGG CGTAAAAGTA CTATGATGGC GGGCGTTTCT
TACGCGCATC ACACCCAATA TGGATTCCTG CGTACCTCAC TGGCAGGGGA TACGTTGGAT
AACAGTAACG GTATTGTCTG GGATCTGGCC TGGCTGTATC GGTATACCAA TGGCGGGCTA
ACCTTAACGC CTGGTATCGG GGTTGAATGG AATAGCGAGA ACCAGAACGA TTACTATTAC
GGCGTATCAC GTAAAGAATC TTCGCGTAGC GGCCTGCGCG GCTATAACCC GAACGATAGC
TGGAACCCGT ATCTTGAACT TAGCGCTAAC TATAATTTCG CCGGTAACTG GAGCGTATAT
GGTACTGCGC GCTACACCCG CCTGTCGGAT GAAATTACCG ACAGCCCGAT GGTGGATAAA
TCCTGGACCG GTATCCTTTC TACTGGCGTG ACCTATAGAT TCTGA
 
Protein sequence
MCKIVGLTGI GGYTFAAEHL NKELWIVTKL KLLALGVFIA TSASVAHAES NLTLGAGVGV 
VEHPYKDYDS DVYPIPVIAY ESENFWFRGL GGGYYLWNDN ADKLSIMAYW SPMYFKPGDS
DDHQLRRLDR RKSTMMAGVS YAHHTQYGFL RTSLAGDTLD NSNGIVWDLA WLYRYTNGGL
TLTPGIGVEW NSENQNDYYY GVSRKESSRS GLRGYNPNDS WNPYLELSAN YNFAGNWSVY
GTARYTRLSD EITDSPMVDK SWTGILSTGV TYRF