Gene SNSL254_A1383 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A1383 
Symbol 
ID6482318 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand+ 
Start bp1355612 
End bp1355863 
Gene Length252 bp 
Protein Length83 aa 
Translation table11 
GC content56% 
IMG OID642736776 
Productputative hemolysin 
Protein accessionYP_002040530 
Protein GI194446266 
COG category[R] General function prediction only 
COG ID[COG3042] Putative hemolysin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value0.000104622 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAATTTA CGTGGATTGC GTTGCCAGGC GTATTGCTGC TGAGCGCTTG TTCATCGTCG 
CAACCCAACG CCCCCAGGCC GCCGCGTATT GGGATGCCTA ATCCGGCAGC CGTCTACTGT 
GAGCAACAGG GCGGTACGCT GATGCCGGTG CAGACCCCAC AAGGCGTGCG TTCCGATTGC 
AAATTGCCCA ATGGCGAAAT CATTGATGAG TGGACATTAT GGCGCAGAGA GCACCCTGAT 
ACGAAAAAGT GA
 
Protein sequence
MKFTWIALPG VLLLSACSSS QPNAPRPPRI GMPNPAAVYC EQQGGTLMPV QTPQGVRSDC 
KLPNGEIIDE WTLWRREHPD TKK