Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A1332 |
Symbol | |
ID | 6484889 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | - |
Start bp | 1320470 |
End bp | 1321144 |
Gene Length | 675 bp |
Protein Length | 224 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 642736730 |
Product | DNA-binding transcriptional regulator PhoP |
Protein accession | YP_002040487 |
Protein GI | 194444063 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.536872 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 58 |
Fosmid unclonability p-value | 0.137 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGCGCG TACTGGTTGT AGAGGATAAT GCATTATTAC GCCACCACCT GAAGGTTCAG CTCCAGGATT CAGGTCACCA GGTCGATGCC GCAGAAGATG CCAGGGAAGC TGATTACTAC CTTAATGAAC ACCTTCCGGA TATCGCTATT GTCGATTTAG GTCTGCCGGA TGAAGACGGC CTTTCCTTAA TACGCCGCTG GCGCAGCAGT GATGTTTCAC TGCCGGTTCT GGTGTTAACC GCGCGCGAAG GCTGGCAGGA TAAAGTCGAG GTTCTCAGCT CCGGGGCCGA TGACTACGTG ACGAAGCCAT TCCACATCGA AGAGGTAATG GCGCGTATGC AGGCGTTAAT GCGCCGTAAT AGCGGTCTGG CCTCCCAGGT GATCAACATC CCGCCGTTCC AGGTGGATCT CTCACGCCGG GAATTATCCG TCAATGAAGA GGTCATCAAA CTCACGGCGT TCGAATACAC CATTATGGAA ACGCTTATCC GTAACAACGG TAAAGTGGTC AGCAAAGATT CGCTGATGCT TCAGCTGTAT CCGGATGCGG AACTGCGGGA AAGTCATACC ATTGATGTTC TCATGGGGCG TCTGCGGAAA AAAATACAGG CCCAGTATCC GCACGATGTC ATTACCACCG TACGCGGACA AGGATATCTT TTTGAATTGC GCTAA
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Protein sequence | MMRVLVVEDN ALLRHHLKVQ LQDSGHQVDA AEDAREADYY LNEHLPDIAI VDLGLPDEDG LSLIRRWRSS DVSLPVLVLT AREGWQDKVE VLSSGADDYV TKPFHIEEVM ARMQALMRRN SGLASQVINI PPFQVDLSRR ELSVNEEVIK LTAFEYTIME TLIRNNGKVV SKDSLMLQLY PDAELRESHT IDVLMGRLRK KIQAQYPHDV ITTVRGQGYL FELR
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