Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A1331 |
Symbol | |
ID | 6484777 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | - |
Start bp | 1319007 |
End bp | 1320470 |
Gene Length | 1464 bp |
Protein Length | 487 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 642736729 |
Product | sensor protein PhoQ |
Protein accession | YP_002040486 |
Protein GI | 194444857 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0246748 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 60 |
Fosmid unclonability p-value | 0.298422 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATAAAT TTGCTCGCCA TTTTCTGCCG CTGTCGCTGC GGGTTCGTTT TTTGCTGGCG ACAGCCGGCG TCGTGCTGGT GCTTTCTTTG GCATATGGCA TAGTGGCGCT GGTCGGCTAT AGCGTAAGTT TTGATAAAAC CACCTTTCGT CTGCTGCGCG GCGAAAGCAA CCTGTTTTAC ACCCTCGCCA AATGGGAAAA TAATAAAATC AGCGTTGAGC TGCCTGAAAA TCTGGACATG CAAAGCCCGA CCATGACGCT GATTTACGAT GAAACGGGCA AATTATTATG GACGCAGCGC AACATCCCCT GGCTGATTAA AAGCATTCAA CCGGAATGGT TAAAAACGAA CGGCTTCCAT GAAATTGAAA CCAACGTAGA CGCTACCAGC ACGCTGTTGA GCGAGGACCA TTCCGCGCAG GAAAAACTCA AAGAAGTACG TGAAGATGAC GATGATGCCG AGATGACCCA CTCGGTAGCG GTAAATATTT ATCCTGCCAC GGCGCGGATG CCGCAGTTAA CCATCGTGGT GGTCGATACC ATTCCGATAG AACTAAAACG CTCATATATG GTGTGGAGCT GGTTCGTATA CGTGCTGGCC GCCAATTTAC TGTTAGTCAT TCCTTTACTG TGGATCGCCG CCTGGTGGAG CTTACGCCCT ATCGAGGCGC TGGCGCGGGA AGTCCGCGAG CTTGAAGATC ATCACCGCGA AATGCTCAAT CCGGAGACGA CGCGTGAGCT GACCAGCCTT GTGCGCAACC TTAATCAACT CCTCAAAAGC GAGCGTGAAC GTTATAACAA ATACCGCACG ACCCTGACCG ACCTGACGCA CAGTTTAAAA ACGCCGCTCG CGGTTTTGCA GAGTACGTTA CGCTCTTTAC GCAACGAAAA GATGAGCGTC AGCAAAGCTG AACCGGTGAT GCTGGAACAG ATCAGCCGGA TTTCCCAGCA GATCGGCTAT TATCTGCATC GCGCCAGTAT GCGCGGTAGC GGCGTATTGT TAAGCCGCGA ACTGCATCCC GTCGCGCCGT TGTTAGATAA CCTGATCTCC GCGCTCAATA AAGTTTATCA GCGTAAAGGG GTGAATATCA GTATGGATAT TTCACCAGAG ATCAGTTTTG TCGGCGAGCA AAACGACTTT GTCGAAGTAA TGGGCAACGT ACTGGACAAC GCTTGTAAAT ATTGTCTGGA GTTTGTCGAG ATTTCGGCTC GCCAGACCGA CGATCATTTG CATATTTTCG TCGAAGATGA TGGCCCAGGC ATTCCCCACA GTAAACGATC CCTGGTGTTT GATCGCGGTC AGCGCGCCGA TACCCTACGA CCAGGACAAG GCGTGGGGCT GGCTGTCGCG CGCGAGATTA CGGAACAATA CGCCGGGCAG ATCATTGCCA GCGACAGCCT GCTCGGCGGT GCCCGTATGG AGGTCGTTTT TGGCCGACAG CACCCCACAC AGAAAGAGGA ATAA
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Protein sequence | MNKFARHFLP LSLRVRFLLA TAGVVLVLSL AYGIVALVGY SVSFDKTTFR LLRGESNLFY TLAKWENNKI SVELPENLDM QSPTMTLIYD ETGKLLWTQR NIPWLIKSIQ PEWLKTNGFH EIETNVDATS TLLSEDHSAQ EKLKEVREDD DDAEMTHSVA VNIYPATARM PQLTIVVVDT IPIELKRSYM VWSWFVYVLA ANLLLVIPLL WIAAWWSLRP IEALAREVRE LEDHHREMLN PETTRELTSL VRNLNQLLKS ERERYNKYRT TLTDLTHSLK TPLAVLQSTL RSLRNEKMSV SKAEPVMLEQ ISRISQQIGY YLHRASMRGS GVLLSRELHP VAPLLDNLIS ALNKVYQRKG VNISMDISPE ISFVGEQNDF VEVMGNVLDN ACKYCLEFVE ISARQTDDHL HIFVEDDGPG IPHSKRSLVF DRGQRADTLR PGQGVGLAVA REITEQYAGQ IIASDSLLGG ARMEVVFGRQ HPTQKEE
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