| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A1327 |
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| Symbol | potA |
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| ID | 6483902 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011080 |
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| Strand | - |
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| Start bp | 1313811 |
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| End bp | 1314947 |
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| Gene Length | 1137 bp |
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| Protein Length | 378 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 642736725 |
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| Product | putrescine/spermidine ABC transporter ATPase protein |
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| Protein accession | YP_002040482 |
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| Protein GI | 194446343 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
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| TIGRFAM ID | [TIGR01187] spermidine/putrescine ABC transporter ATP-binding subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.657677 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 57 |
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| Fosmid unclonability p-value | 0.141247 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGACAGA GTAAGAAATT GAATAATCAA CCGCGTTCGC TTTCACCGCT GGTGCTTTTG
TCGGGAATTA GCAAAAGTTT CGATGGCAAA GAGGTCATTT CACAGCTGGA TTTGACCATT
AACAATGGCG AATTCCTCAC GCTGCTTGGC CCTTCCGGCT GCGGTAAAAC AACCGTTCTT
CGCCTGATTG CCGGCCTGGA AACCGTTGAT GCCGGGCATA TCATGTTGGA TAACCAGGAT
ATCACCCACG TTCCCGCCGA AAATCGTTAT GTAAATACCG TATTTCAAAG CTACGCTTTA
TTTCCGCATA TGACGGTGTT TGAAAATGTC GCGTTTGGCT TACGGATGCA AAAAACGCCA
GCCGCCGAGA TAGCGCCTCG CGTGACCGAT GCGCTGCGTA TGGTGCAGCT TGAAGAGTTT
GCACAACGTA AACCGCACCA GCTTTCCGGC GGACAGCAGC AGCGTGTGGC TATCGCTCGC
GCGGTGGTGA ATAAACCTCG CCTGTTATTA CTGGATGAAT CGCTTTCCGC GCTGGACTAT
AAATTGCGCA AACAAATGCA GAACGAGCTT AAAGCATTAC AGCGTAAACT CGGTATCACG
TTTGTTTTTG TCACTCACGA TCAGGAAGAA GCGCTCACCA TGTCCGATCG TATCGTGGTA
ATGCGTAATG GCGTGATTGA GCAAGACGGC ACGCCGCGTG AAATCTATGA AGAGCCAAAA
AACCTGTTTG TCGCCGGTTT TATCGGCGAA ATTAACCGCT TTGACGCAAC CGTCATTGAA
CGGCTTGATG AACAGCGCGT CCGCGCCAGC GTAGAAGGTC GGGAGTGCAA TATATACGTC
AATTTCGCTG TCGAACCAGG CCAAAAACTG AACGTCCTGC TGCGACCGGA AGATCTACGC
GTCGAAGAGA TCAACGATGA TAACCACATC GAAGGGCTTA TCGGCTACGT GCGCGAGCGC
AATTATAAAG GTATGACGCT GGAGTCGGTG GTTGAACTGG AAAATGGCAA AATGGTGATG
GTCAGCGAAT TCTTCAACGA AGACGATCCT GACTTCGACC ATTCACTTGA CCAAAAAATG
GCCATTAGTT GGGTAGAAAG CTGGGAGGTC GTACTGGCTG ATGAAGAACA CAAGTAA
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| Protein sequence | MGQSKKLNNQ PRSLSPLVLL SGISKSFDGK EVISQLDLTI NNGEFLTLLG PSGCGKTTVL
RLIAGLETVD AGHIMLDNQD ITHVPAENRY VNTVFQSYAL FPHMTVFENV AFGLRMQKTP
AAEIAPRVTD ALRMVQLEEF AQRKPHQLSG GQQQRVAIAR AVVNKPRLLL LDESLSALDY
KLRKQMQNEL KALQRKLGIT FVFVTHDQEE ALTMSDRIVV MRNGVIEQDG TPREIYEEPK
NLFVAGFIGE INRFDATVIE RLDEQRVRAS VEGRECNIYV NFAVEPGQKL NVLLRPEDLR
VEEINDDNHI EGLIGYVRER NYKGMTLESV VELENGKMVM VSEFFNEDDP DFDHSLDQKM
AISWVESWEV VLADEEHK
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