Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A1307 |
Symbol | thiK |
ID | 6486767 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | + |
Start bp | 1293556 |
End bp | 1294380 |
Gene Length | 825 bp |
Protein Length | 274 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 642736705 |
Product | thiamine kinase |
Protein accession | YP_002040462 |
Protein GI | 194443912 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0510] Predicted choline kinase involved in LPS biosynthesis |
TIGRFAM ID | [TIGR02721] thiamine kinase |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.435558 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 0.000000123705 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGCGGTCCA ACAACAATAA TCCCTTAACG CGCGACGAGA TCCTGTCGCG CTATTTTCCC CAGTATCGTC CCGCCGTCGC CGCATCGCAG GGGCTAAGCG GCGGGAGCTG TATTATTGCC CACGATACTC ACCGTATCGT GCTGCGCCGT CATCACGACC CCGACGCTCC ACCAGCCCAT TTTTTACGTC ATCACCGCGC CTTATCCCAA TTGCCAGCCA GTCTGGCGCC GCGAGCGCTT TTTTATACGC CGGGCTGGAT GGCGGTAGAA TATCTGCATG GTGTGGTAAA TTCCGCTCTG CCAGATGCCG ACGAACTGGC GGCCTTACTG TATCATTTGC ATCAACAGCC GCGTTTTGGC TGGCGTATCG CGCTATCGCC ACTATTGGCG CAGTACTGGT CGTGTTGCGA TCCGGCAAGG CGTACGCCGT TTTGGTTGCG GCGGCTCAAA CAGTTGCAAA AAAACGGTGA ACCTCGCCCG CTGCGGCTCG CGCCTTTGCA TATGGATGTC CATGGCGACA ATATAGTATT AACGTCCGCC GGGTTGAGAC TGATTGACTG GGAGTATGCC GGTGACGGCG ATATTGCGTT GGAGCTGGCG GCAGTATGGG TTGAGGATGA ACGCCAGCAC CGACAACTGG CAAACGCTTA TGCCGCGTGC GCGCGAATCG ACGCCCGGCA GCTATGGCGA CAGATACGAT TATGGCACCC CTGGGTCATT ATGCTAAAAG CAGGGTGGTT CGAATACCGC TGGCGACAAA CCGGCGAGCA ACAATTTATC AGGCTGGCCG ATGAAACCTG GCGCCAGCTA CGTATGAAAG GATAA
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Protein sequence | MRSNNNNPLT RDEILSRYFP QYRPAVAASQ GLSGGSCIIA HDTHRIVLRR HHDPDAPPAH FLRHHRALSQ LPASLAPRAL FYTPGWMAVE YLHGVVNSAL PDADELAALL YHLHQQPRFG WRIALSPLLA QYWSCCDPAR RTPFWLRRLK QLQKNGEPRP LRLAPLHMDV HGDNIVLTSA GLRLIDWEYA GDGDIALELA AVWVEDERQH RQLANAYAAC ARIDARQLWR QIRLWHPWVI MLKAGWFEYR WRQTGEQQFI RLADETWRQL RMKG
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